Brassica oleracea (wild cabbage): 106335737
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Entry
106335737 CDS
T04124
Name
(RefSeq) ubiquitin domain-containing protein DSK2b-like
KO
K04523
ubiquilin
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106335737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106335737
03051 Proteasome [BR:
boe03051
]
106335737
Membrane trafficking [BR:
boe04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
106335737
Proteasome [BR:
boe03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
106335737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Mod_r
TBK1_ULD
Dsc3_N
CUE
Ubiquitin_5
Rad60-SLD_2
UBA_HOIP
UN_NPL4
Motif
Other DBs
NCBI-GeneID:
106335737
NCBI-ProteinID:
XP_013629787
LinkDB
All DBs
Position
C3:complement(33874523..33877798)
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AA seq
557 aa
AA seq
DB search
MGGEGDSSKPQTAGDGGDVVAVNVRCSNGSKFSVSTSLDSTVEAFKELVAQNSEVPANQQ
RLIYKGRILKDDQTLLSYGLQADHTVHMVRGSAPSSSPPPSAPATTQTTAPGVTRGVGSN
DSSIPGLGFNPLGGGNAMSGLFGAGLLDLEQAQQQLAQNPNMIRDMMNQPAIQSLMNNPE
FMRSIIMSNPQMRDLVDRNPELGHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIE
SMPEGFNHLRRMYENVQEPLMNATTMPGNGGSNAASNPFAALLGNQGVTTDAASNNSTTQ
NAETGTGNGIPNANPLPNPWGATAGQTNAPGTTNSGGDTRSTGLGGLGGLGGLGGLGGLG
GLGGLGGLGMLGADSPLGATPDASQLSQILQNPAMSQMMQSVLSNPQYMNQLMNLNPQLR
TMLDSNPQLREMMQNPDFLRQFSSPEMMQQMMTLQQSLFSQNRNTTTQDPGQTGAAAAGA
GNNAGLDLLMNMFGSLGAGGLGSTNQPNVPPEERFATQLQQLQEMGFYDRAENIRALLAT
NGNVNAAVERLLGSIGQ
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgggtggagaaggagattcgagtaagccgcagactgctggtgacggaggagatgtggtg
gccgtgaacgtgaggtgctcgaacggatccaaatttagcgtgagcacgagtcttgattcc
acggtggaggccttcaaagagctggtggctcagaacagcgaagtgccagcgaatcagcag
cgtctgatttacaagggtcggatcctcaaagacgatcagacgcttctcagctatggtttg
caggctgatcacaccgttcatatggttcgaggctctgcgccttcatcatcaccaccaccc
tctgctccagctacaacccaaaccactgcacctggtgttactcgaggtgttggttcaaac
gacagctcaatccctggtcttggattcaatcctctgggtggtgggaacgctatgtctgga
ctattcggagctggtcttctggatcttgagcaggcgcagcaacagctagctcagaaccct
aacatgattagagatatgatgaaccaaccagccattcagagtctaatgaacaaccctgag
tttatgaggagtataatcatgagcaaccctcagatgcgtgaccttgtggatcgcaaccct
gagctcggtcatgtcctcaatgaccccagcatacttcggcagactttggaagcggcaagg
aacccggagctgatgcgtgagatgatgaggaatactgatagggctatgagtaatattgag
tctatgcctgaggggtttaaccatcttaggcgtatgtatgagaatgtccaggaaccgctc
atgaatgccactactatgcctgggaacggtggaagcaatgcggcttctaatccgtttgct
gctctccttggtaaccaaggggttactaccgatgctgcttctaataattctacgacacaa
aatgctgaaacggggacaggaaatggtattccgaatgcaaatccacttcctaatccttgg
ggtgcaacggctggccagacgaatgcccctggaactacaaattctggtggggatacaaga
agcactggccttggtggtcttggtggacttggtggtcttggagggcttggtggacttggt
ggtcttggagggcttggtggactgggtatgcttggagcggattcaccacttggtgccact
ccagatgcttctcagttgagccagatattgcaaaatccagccatgtctcagatgatgcaa
agcgtcctttccaatccacaatacatgaaccagcttatgaatctcaacccacaactgaga
accatgctagattcgaatcctcagctaagggaaatgatgcagaacccagatttccttcgt
cagtttagctcccccgagatgatgcagcaaatgatgactctacagcagtcactgttctct
cagaataggaatacaaccacccaggatccggggcaaactggtgctgctgcagcaggggca
ggcaataacgcagggctggatttattgatgaatatgtttggcagtcttggtgctggtggc
ctgggtagcacgaaccaacccaatgttcctcctgaagaacgctttgcgactcagttgcaa
cagctgcaagaaatgggattctatgacagagcagagaacataagggctttgcttgcaacc
aatggaaacgttaacgctgctgtagaacgactcttgggaagtattggccagtag
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