Brassica oleracea (wild cabbage): 106335761
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Entry
106335761 CDS
T04124
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
106335761
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
boe03009
]
106335761
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
106335761
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_2
AAA_5
TIP49
AAA_16
RNA_helicase
AAA_22
AAA_28
AAA_14
AAA_17
AAA_33
nSTAND3
AAA_18
IstB_IS21
Rad17
NPHP3_N
Mg_chelatase
Cytidylate_kin2
Viral_helicase1
ATPase_2
ABC_tran
Parvo_NS1
Vps4_C
TsaE
AAA_3
Bac_DnaA
NB-ARC
AAA_11
Zeta_toxin
Sigma54_activ_2
AAA_lid_PRS2_C
Motif
Other DBs
NCBI-GeneID:
106335761
NCBI-ProteinID:
XP_013629821
UniProt:
A0A0D3B990
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All DBs
Position
C3:complement(21727977..21731444)
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AA seq
822 aa
AA seq
DB search
MVRRGRGGGMGGGINRRYLSQVMDSCGKDLATAEEMVDDLRSRYGNFARLTRQVLLLNVR
NVLSARNKRAKDEVEDDNNGGDDSDGGGAAPSKMKKPRRVDEKEEKLQRAEQSHLKRRNR
EKSPSSSSSEEDSGDISTSEDAIYSQKLSPRFDLINDSLRDNYAKMNNSPAAKKPIVEVE
TVTNNNKGRSKMTTMGLKKEARVSLPLSGTTPTHNNNKGGGGGPTFKDFGGIKKVLDDLE
NYILFPLLNPPPFMTMGVKPPSGILFHGPPGCGKTQLANAIANEVGVPFYQISATEVVSG
VSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSKRENQQREMEKRIVTQLLTCMDGPRN
KKNDDADSSSSGYVLVIGATNRPDALDPALRRSGRFEREIALNVPDEDARAEILSVVAQR
LRLEGSFDMKRIARLTPGFVGADLEGVANMAGSLGIKRVKDSRKLQLSGDSDNQDDRSWL
RQPWSEEDLEKLFVRMSDFEEAVKLVKGSLTREGFSTVPNVTWGDVGGLDHLRLELNNYI
VRPIKNPEIYKAFGASLETGFLLYGPPGCGKTLVAKAVANEAGANFIHIKGPELLNKYVG
ESELAIRTLFQRARTSSPCVLFFDEVDALTTSRGREGGSVVESVLNQFLTELDGGERRNV
YVIGATNRPDVIDSALLRPGRFGNLVYVPLPNADERVLILKSIAKKRPIDPSVDLDAIAK
NCEGFSGADLANLMDKAIHVAVKEKFGSSESSEDNNIDLSDCTIKMTHFEQALSLVTPSV
SKQQIKHYEELPKKLQRSTGRNNMEQINVGSSFTLEENKVLS
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggagaggtcgcggcggtggtatgggcggaggaataaatcggagatacctgagt
caagttatggattcgtgcgggaaggacttagctacggcagaggaaatggtggatgacctt
cgttccaggtacggtaacttcgcgaggctgacccgtcaagtgctcctgctcaacgtcagg
aatgtcctcagtgcccgaaacaagcgtgccaaagacgaagtggaagatgacaacaacggc
ggcgatgattccgatggtggtggtgctgctcctagtaagatgaagaaaccgagacgtgtt
gatgagaaagaggagaagttgcagcgagctgagcaatctcatctcaagaggagaaacaga
gagaagtctccttcttcttcttcgtctgaagaagacagtggcgatatctccacttctgag
gacgccatatacagccagaagctgagcccgaggtttgatttgatcaatgacagcttacga
gataactacgctaagatgaataatagccccgccgccaagaaaccaattgtggaagttgag
actgttaccaacaacaacaaaggtagaagcaagatgactacaatggggcttaaaaaggaa
gctagagtctctcttcccttgagcggaactactcctactcataataataataaaggagga
ggaggaggacctacttttaaagactttggtgggattaaaaaagtgttggatgatttggag
aattatatcctcttccctcttctcaaccctcctccctttatgacgatgggagtcaagcct
cctagcggcattctcttccacggcccacctggctgtggcaagactcagctcgccaatgcc
attgccaatgaagtcggtgttcccttttatcagatttcagctactgaagtcgtttctggc
gtctctggtgcttctgaagagaatattagagagctcttctccaaagcctataggaccgcg
ccttccattgtgtttatcgatgagattgatgccattggatctaagagggagaaccagcaa
cgggagatggagaagcggattgttactcagttattgacttgtatggatggacctcgtaac
aaaaaaaatgatgatgctgattctagttcttctggatatgttctcgtcattggagctact
aacaggcctgatgctcttgatcctgctctcaggagaagtgggcgatttgagcgcgagatt
gctctaaacgtccctgatgaagatgccagggctgagatactctctgttgtagctcaaagg
cttagacttgaaggttcctttgacatgaaaagaatcgctcgcttgacaccgggttttgtt
ggagctgatttggaaggtgtagctaacatggctggaagcctaggcataaagagggtcaag
gattcaagaaaattgcaactgtccggtgacagtgacaaccaggatgataggtcttggctg
aggcagccatggtcagaagaagatttggaaaagctctttgtcagaatgtctgattttgag
gaagcagtgaagttagttaagggatctttaactagagaaggtttctctaccgtgcctaat
gtcacatggggggatgttggtggacttgaccatctacggcttgaactcaacaattacata
gttaggcctataaaaaatccagagatttataaggcttttggagcgagcttagagacaggt
ttcttgctctatggaccaccgggttgtggtaagacgttggttgcaaaggcagttgcaaac
gaggcaggagctaatttcatacacattaagggtccagaacttctaaataaatacgttgga
gaaagcgagcttgctattaggaccttgtttcagcgcgcccggacaagctcgccatgtgtg
ctcttctttgatgaggtggatgctttgacaacaagtcgaggcagagaaggtggttcggtt
gttgaaagtgttttgaaccagtttcttactgaactggacggtggagagagacgtaatgtg
tatgtaattggagctacaaaccggcccgatgtgattgattctgctttactaagaccgggt
aggtttgggaatcttgtgtacgtaccgctgcctaacgcggatgagcgtgttttaatcctc
aaatcaattgcaaagaagagaccaatagatccgagtgttgatctggatgccattgcaaag
aactgtgaaggtttcagcggagctgatctcgctaacctgatggacaaagctatacacgtg
gcagtgaaggagaaattcgggtccagtgagtcgtctgaagataataatatagatttaagt
gattgtaccatcaagatgactcatttcgagcaagccttgtccttagtcacaccatctgtg
agcaaacagcaaataaaacactatgaggaacttccaaagaagctacaaagaagcacggga
agaaacaacatggagcaaatcaacgtaggatcatcttttaccctcgaggaaaataaagta
ctctcttaa
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