Brassica oleracea (wild cabbage): 106336088
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Entry
106336088 CDS
T04124
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106336088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106336088
03029 Mitochondrial biogenesis [BR:
boe03029
]
106336088
Membrane trafficking [BR:
boe04131
]
Autophagy
Autophagosome formation proteins
ULK complex
106336088
Atg1 complex
106336088
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
106336088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
106336088
NCBI-ProteinID:
XP_013630266
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All DBs
Position
C3:complement(38995287..38997769)
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AA seq
582 aa
AA seq
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MDFPENLPSPDIGRLEQIVSHFFPKALHIVLDSRIPSLQSRGRTRDRSSGGLNVKKSDKW
FNLIMGDRPAALDKLHSWHRNILDSMIIDIILIHPTDDDGDDGNVRSAETVIERWVVQYE
NPLIMSPQSSDPSTRYQKVYKKAIILLRSLYAQTRLLPAYRVSRQLSSSLGYEMVYKVSS
FSDVFSPPVTETMKEFRFSPVEVPPGRLCASVTYRSDLSDFNLGAHITLPPRIITDYVGS
PATDPMRFFPSPGLSFEGTSFQGRAGRPRPPLTTSSASERPHSWTSGFHRPPTPNQSFSP
DFHWSRTDGGDSHHQLSPPFSPSGSPSTPRGSYSPRINVRPGTAPVTIPSSATFNRYVSS
NFSEPSRNPLPPFSPKSTRRSPSSQDSLPGIALYKSSRSGESPSGLLNHYPGHKLTKDSK
YDSGRFSGLLSSSGSPRFGFSRSPSRLSSDLEDPDCSCPFDFDDVDESGLQYRLKCQSLD
RRKTSSSISQSLPIGRKSQDAAVGVLVQMLKTAPPLRQDSSTYMASSMSGVQREGSSVSG
AESEFSMARSTSDALEELRNYKQLKDLLLSKSKSVGGATRVH
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggattttcccgagaatctgccatcaccagacatcggaagattagagcagatcgtatct
cacttcttcccgaaggcactgcacatcgtcctcgactccagaatcccttccttgcaatcc
cgtggccgtactcgcgaccgttcatcgggtggtctcaacgtcaaaaagagcgataaatgg
tttaatctcataatgggagaccgtcccgcagcgttagacaagttgcattcttggcatagg
aacatcttggattcgatgatcatcgacatcatcctcatccatcccactgacgatgacggt
gacgatggcaatgtacgatctgccgagactgtgatcgagcgttgggttgttcaatacgag
aatccgttgatcatgtcccctcaaagctctgatccttccactcgttaccagaaggtttac
aagaaagctatcattctgctgcgttctctctacgctcagactcggcttttgcctgcctac
cgtgtctccaggcagctgagttcgtctcttgggtatgaaatggtctacaaggtttcgtct
ttcagcgatgtcttctctcctcccgtgactgagaccatgaaagagtttcgcttttctcct
gttgaagtgcctcctggtcgtctctgcgcatctgttacttaccgttctgacttgtctgac
ttcaatctcggtgctcacatcacattgcctccgaggatcataaccgattacgttgggagt
cccgccacggatcctatgaggttcttcccttctccagggctgagctttgaaggtacttct
tttcaaggtagagctggacggccacggcctccgttgactactagctcagcttctgaacgt
ccccatagctggaccagtggctttcacagacctcctaccccaaaccaatctttctcccct
gatttccactggtcccgtactgatggtggtgacagtcaccaccagctttctcctcccttt
tcgccatcaggttctccttctactccaagagggagttacagtccaaggattaatgtgagg
cctggtactgctccagtgaccattccttcttcagctacgttcaatagatacgtttcatct
aacttctctgagccaagtaggaatccactccctcctttttcccctaaaagcaccagacgc
tccccttcatcgcaggactctctgcctgggattgctttgtacaagagttcgagaagcgga
gaatctccttctggactacttaaccactaccctggccacaagctgacaaaggacagcaaa
tacgattcaggccggttctctggactgctctcttcaagtggctcaccaagattcggcttt
tctaggagcccgagtagattatcttcggatttggaggaccctgattgttcatgccctttt
gatttcgatgatgttgacgagtctggactccagtacaggttaaaatgccaaagtcttgac
cggaggaaaacttcaagctctatatcacagtcgctacctatagggaggaagtcacaggac
gcagcggttggagtcctggttcagatgctaaagacagcaccgccattacgacaagactca
agcacttacatggcgtcatcaatgtctggtgttcagagagaaggtagttcagtgtcaggt
gcagaatctgaattttcgatggctcgaagtacatcagatgcactagaggagctcagaaac
tacaagcagctcaaagacttgcttctctccaaatccaagagtgttggaggagcaactcgt
gtccactga
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