Brassica oleracea (wild cabbage): 106336301
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Entry
106336301 CDS
T04124
Name
(RefSeq) chaperonin 60 subunit beta 3, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106336301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106336301
03110 Chaperones and folding catalysts [BR:
boe03110
]
106336301
03029 Mitochondrial biogenesis [BR:
boe03029
]
106336301
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106336301
Enzymes [BR:
boe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106336301
Messenger RNA biogenesis [BR:
boe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106336301
Chaperones and folding catalysts [BR:
boe03110
]
Heat shock proteins
HSP60 / Chaperonin
106336301
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106336301
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106336301
Exosomal proteins of other body fluids (saliva and urine)
106336301
Exosomal proteins of breast cancer cells
106336301
Exosomal proteins of colorectal cancer cells
106336301
Exosomal proteins of bladder cancer cells
106336301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
106336301
NCBI-ProteinID:
XP_013630543
UniProt:
A0A0D3B358
LinkDB
All DBs
Position
C3:complement(6897552..6900895)
Genome browser
AA seq
595 aa
AA seq
DB search
MASTFSATSSMGSSLAPPASRLSSLVSSNSFGKSQAFAQRKARFPKIYAAKQLHFNKDGT
AIRKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENIGA
KLVRQAASKTNDLAGDGTTTSVVLAQGLITEGVKVVAAGANPVLITRGIEKTTKALVAEL
KKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVTLEEGKSAENSLYVVEG
MQFDRGYISPYFVTDSEKMCAEYENCKMFLVDKKITNARDIISILEDAIKGGYPLLIIAE
DIEQEALATLVVNKLRGTIKVAALKAPGFGERKSQYLDDIAALTGATVIREEVGLQLEKV
GAEVLGNAGKVVLTKDTTTIVGDGSTEEVVKKRVEQIKNLIEAAEQDYEKEKLNERIAKL
SGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIKES
LANDEEKVGADIVKKALSYPLKLIAKNAGVNGSVVSEKVLSSDDPKHGYNAATGKYEDLM
AAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEINEPESAAPAGNPMGNSGYGF
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaccttcagcgcaacgtcttcaatgggctcatccttagctcctcctgcgagc
agattatcatctctcgtctcatcaaactcttttggaaagagtcaagcttttgctcagagg
aaagcgaggttccccaagatctacgcggctaagcagttgcatttcaataaagacggcact
gccattaggaagcttcaagctggtgtgaacaagctcgcggatctagttggagtcactcta
ggtcctaaaggcaggaacgttgttctcgagagcaagtacggctctccaagaatcgttaac
gacggtgttacagtcgctagagaggttgagcttgaggatccagttgagaacattggtgct
aagctagtgaggcaagctgcttccaagaccaatgacttagccggtgacggaacgaccact
tccgttgttcttgcgcaaggtctcatcactgaaggtgtaaaggtggtggctgctggtgca
aacccggtgttgatcaccagaggaatcgagaaaaccacaaaagctcttgttgccgagtta
aagaagatgtcaaaagaggtggaagatagtgagcttgcagatgtggcagcagttagtgca
ggaaacaactacgaagtaggcaacatgattgcggaagcaatggctaaagttggacgcaaa
ggtgtggtcactctcgaagaaggcaaaagcgctgagaacagtctctacgtcgttgaaggg
atgcagtttgaccgtggctacatttctccttactttgtcactgacagtgagaagatgtgc
gcagaatacgagaactgcaagatgtttcttgttgacaagaaaataacgaacgctagagac
attatcagtatcctggaagatgctatcaaaggtggttacccgcttctgatcattgctgaa
gatatcgagcaagaggcgttggcgactcttgttgttaataagcttcgtggtactatcaaa
gttgctgctctgaaagctcccggatttggagagaggaagagtcagtaccttgatgacatt
gctgctcttacaggagctactgtgattagggaagaagttggactacagctggagaaagtt
ggagcagaagttttgggtaatgctggtaaagtggttctcacaaaagacactacgaccata
gttggtgatggaagtactgaagaggttgtgaagaagagagttgaacagatcaagaatctt
atcgaggctgctgagcaagattatgagaaggaaaagcttaatgagagaatcgctaaatta
tcaggcggtgttgctgtgattcaggttggagcacaaactgagacagagcttaaggagaag
aaactgagagttgaagatgctcttaatgctacaaaggcggctgtggaagaaggtattgtt
gttggaggtggatgcactctgctaagacttgcatccaaagtggatgctattaaagagagt
ctagcaaatgatgaagaaaaggttggagctgacattgttaagaaagcattgagctaccca
ttgaagttaatcgccaagaatgctggtgttaatggcagtgttgtcagcgaaaaggtactc
tctagcgacgacccaaagcatggttacaacgctgcaacaggcaaatacgaagatctgatg
gctgcaggaatcattgatccaaccaaagttgtgagatgttgcttagagcatgcttcatca
gtggctaagacattcttgatgtctgattgtgtggttgtggagatcaatgagcctgaatca
gcagctcctgctggtaaccctatgggcaactcaggttatggcttctaa
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