KEGG   Brassica oleracea (wild cabbage): 106336344
Entry
106336344         CDS       T04124                                 
Name
(RefSeq) transportin-3
  KO
K15436  transportin-3
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03013  Nucleocytoplasmic transport
boe03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    106336344
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    106336344
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:boe03016]
    106336344
Transfer RNA biogenesis [BR:boe03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    106336344
SSDB
Motif
Pfam: Xpo1 TPR_TNPO3_IPO13_2nd TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd IBN_N Importin_rep_3
Other DBs
NCBI-GeneID: 106336344
NCBI-ProteinID: XP_013630604
UniProt: A0A0D3BFQ3
LinkDB
Position
C3:37912030..37920511
AA seq 957 aa
MEHENAVKEALNALYHHPDDTVRAQADRWLQNFQGTLDAWQVADNLLHDSSSNLETLIFC
SQTLRSKVQRDFEELPPGAFQKLRESLTTLLKKFHKGPPKVRTQISIAVAALAVHVPAAD
WGDAGIVSWLRDEMNMHPEYVPGFLELLTVLPEETFNYKIAARPDRRRQFENELTSQMEA
ALSILTACLNIIELKEQVLEAFASWLRLRHGIPGAVLACHPLVHAALSSLNCDPLSDASV
NVISELIHHTASPSSGGISAQTPLIQVIVPQILSLKAHLRDSSKDEEDVKAIGRLFADVG
DSYVELIATGSDESMVIVHALLEVTAHPEFDIASMTFNFWHSLQLTLTKRDSYISLGSEA
SIEAERNRRQHVFRPAYENLVSLVGFRVQYPEDYQDLSYEDLKEFKQTRYAVADVLTDAA
SILGGDTTLKILYMKLLEANAQPGNGFQEWRPAEAILFCIWAISNYVSVVEAEVMPQVMA
LLQNLPQQAQLLQTACLLVGAYSKWLNAAPASVSILPSIIRILMSGMGASEDCAAAAALA
FRHICDDCRKNLCGYFEDLFTIYCTAINGGSGYKVSAEDSLNLVEALGMVVTELPLDQAR
SALEKLCLLAASPLEEAAKEDLDKKHARELTVHIDRFAFLFRYVNHPEAVAAEINKHWAI
FRVIFDARPWDMRTMEALCRACKYAVRTSGRYIINTIGEMLAKIQFHYQHHHQPCFLYLS
SEVIKIFGSDPSCADYLKNLIETLFAHTTCLMTSIKEVTARPDIADDCFLLASRCLRYCP
HLFIPSPIFSPIVDCAIIGMTVQHREACHSILTFLSDIFDLEKSVNEEQFKRIRDNVIIP
RGATITRILISSLAGALPSSRLDTVTYALLALTRTYGLQAVGWAKATVSLIPRTAVTETE
SAKFLQGLSDAAYGADVNSLIGHAEELSDVCRRNRTVQELVQAALKPLELNLVAPVS
NT seq 2874 nt   +upstreamnt  +downstreamnt
atggagcacgagaacgcggtcaaagaagccctaaacgcactgtatcatcatccggatgat
acagtacgtgctcaagctgatcgatggctccagaacttccaaggaaccctcgatgcttgg
caggttgcggataacttacttcatgattcttccagcaatttggaaactttgatcttttgt
tctcagacccttcgaagcaaggttcaacgagattttgaagaactaccacctggggctttt
cagaagctacgggaatcactaacgacattgttaaaaaagtttcacaaaggccccccgaaa
gttaggacccagattagtattgctgttgctgccttggcggtgcacgttcctgcggctgat
tggggagatgctggtatagttagctggcttagggatgagatgaatatgcatcctgagtat
gtgcctggtttcttggaactcttgacagttttgcccgaggaaacgtttaactacaaaata
gctgctcgtccggatcgacgacgtcaatttgagaatgagcttacttcgcaaatggaagct
gcacttagtatattaacagcatgtttgaatataattgaacttaaggaacaggttcttgag
gcatttgcttcttggctccgtcttaggcatgggattcctggagcagtgcttgcctgtcat
ccattggttcacgcagctctctcaagtttaaactgcgatccactctccgatgcatctgtc
aatgttatctccgaattgatacatcatacggcatcgccaagctctggtggtatttctgcg
caaacacccttaattcaagttattgtgcctcaaattctaagtcttaaggcgcatctaaga
gattcttcaaaggatgaagaagatgtcaaagccattggtcgattatttgccgacgttggg
gattcatatgttgaattgattgcgactggttcagatgaatcgatggttattgtgcatgcc
ctgctggaagttactgcgcacccagaatttgatatagcctcaatgacctttaacttttgg
cacagtcttcaacttacgttgacgaagagggattcttatatatctttgggtagtgaagca
tctattgaagcggaaagaaatcgaagacagcatgtcttccggccagcctatgagaacctt
gtatctttggttggcttcagagttcagtatcctgaagattatcaagacctctcgtatgag
gaccttaaagaattcaagcagacaagatatgctgttgcagatgtattaactgatgctgcg
tcaatcctgggaggtgatacaacgcttaagattctctatatgaagcttcttgaggccaat
gctcagccaggaaatgggtttcaagaatggcgtcctgctgaagctattttgttctgtatc
tgggcaatatccaattatgtttcagtggttgaagctgaagtgatgccccaggtgatggcc
ttgcttcagaatcttccacagcaagcgcaactgcttcagacagcatgcttacttgttggg
gcttattcaaaatggcttaatgctgcgccagctagtgtgtcaatattgccttcgatcatt
agaattcttatgagcggaatgggggcatctgaggattgtgcagcagctgcagctttggct
tttagacatatctgtgacgattgccgaaaaaatctttgcgggtatttcgaagatttattt
acaatctattgtacggcaattaatggcggcagtggttataaagtatctgctgaggattcg
ctaaatctcgttgaagctttaggtatggttgttacagaacttcctttagatcaagccagg
agtgcgcttgagaaattatgcttattagccgcttctcctttagaggaagctgcgaaagaa
gatttggacaagaagcatgcccgggaattaactgttcatattgatcggtttgccttcctg
ttcaggtatgtgaaccaccctgaagctgttgctgctgagatcaataaacattgggctatt
ttcagagtaatttttgatgctcgtccttgggacatgaggacaatggaagctctatgcaga
gcatgcaaatatgctgtacgtacttctggaagatacataattaacacaattggggaaatg
ctggcaaaaattcaattccactatcagcatcatcatcagccatgctttctctatctctcc
agtgaagttataaagatttttggttcagacccgtcttgtgctgactacttgaagaatctg
attgaaacactctttgctcacacaacatgtcttatgacaagtatcaaggaagtcactgct
agaccagacatagctgatgattgctttttgttggcatcgagatgtctccgttactgtccg
catttatttattccttctcctatattttcaccaattgtagattgcgcaattattggaatg
acggtgcagcacagagaggcctgccactcgatattgaccttcttatccgacatttttgac
ctcgagaaatctgtgaatgaagagcagttcaaacgaatcagggacaatgtcattattccc
cggggagctacaatcaccagaatcttgatttcatcattagcaggagcacttcccagttct
cggctggatacggtaacatatgcgctgctagctctgaccagaacatacggtttacaagca
gtgggttgggctaaggcaactgttagcctgatacctcgaacagctgttacagagaccgag
tctgctaagttcttacaagggttatccgatgctgcttatggagcagatgtcaattctctg
ataggacacgcagaggaactttcagatgtttgtcgccgtaaccgtaccgttcaagaactt
gttcaggcagctttgaagcctcttgagttgaatctggttgctcctgtatcataa

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