Brassica oleracea (wild cabbage): 106336372
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Entry
106336372 CDS
T04124
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106336372
04121 Ubiquitin system [BR:
boe04121
]
106336372
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106336372
Membrane trafficking [BR:
boe04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
106336372
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106336372
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-Nse
DZR_2
HypA
Rad50_zn_hook
VPS18_RING_C
zf-WRNIP1_ubi
Motif
Other DBs
NCBI-GeneID:
106336372
NCBI-ProteinID:
XP_013630644
UniProt:
A0A0D3B646
LinkDB
All DBs
Position
C3:13633911..13635977
Genome browser
AA seq
303 aa
AA seq
DB search
MSSGGNTHWCHRCQRAVRLHGRDPVCSYCGGGFVELLELPQASPFGMFRSHRDVVERDPT
FDLMDAFSDFMRNRETRARSISSGPENFPGLAPLLIFGGQVPYRLSGIESLFNGGSPGIG
ITRGNHTGDYFFGPGLEELFEQLSAGTTTRSGPPPAPRSSIDALPTIKIAQRHLRSSDSN
CAVCKDEFELGAEAKQMPCNHIYHSDCIVPWLVQHNSCPVCRQELPSATSSQNRTTTRNN
RSSSNERRSPFSSFWPFRSSGSTSNSTHNRGSSASNSDGTDENHNYHQQQQSHMGYGGWP
FDY
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcggtggaaacacccactggtgccatagatgccagcgtgctgtccggctacac
ggacgagaccctgtatgttcttattgtggaggtggttttgttgaactgcttgaactccct
caagccagcccatttggtatgttcagatctcacagggacgtcgtggaacgtgatcctact
tttgatctcatggatgctttctccgactttatgaggaaccgagaaaccagagcaagatcc
atcagctctggtcctgagaactttcccggtctggctcctctcttaatctttggtggtcag
gttccttacagactatctggaatcgaatccctcttcaacggcggctcgcctggcatcggc
atcacacgtggtaaccacactggtgactacttcttcggtcctggtcttgaagagctcttt
gagcagctttcagctgggactactactcgcagcggaccaccacctgctcctagatcttca
atagatgcattgcctaccatcaagatcgctcagaggcatcttaggtcttcggactccaac
tgtgctgtgtgcaaagacgaatttgaattgggagcagaagcgaaacagatgccttgtaac
catatctatcattctgactgcattgtcccgtggctggttcagcataactcatgcccggtc
tgtcgccaagagctgccgtcagctacaagtagtcaaaacagaaccaccaccagaaacaac
agaagtagtagcaatgaaaggaggagtcctttctcttccttctggccatttcgttcgtct
ggttcaacctcaaactctactcacaaccgcggaagcagcgcaagtaactcggatggaacc
gatgagaaccataactaccatcaacagcaacagtcacatatgggttacggtgggtggcct
tttgattactaa
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