Brassica oleracea (wild cabbage): 106336396
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Entry
106336396 CDS
T04124
Name
(RefSeq) diaminopimelate decarboxylase 2, chloroplastic
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00300
Lysine biosynthesis
boe00470
D-Amino acid metabolism
boe01100
Metabolic pathways
boe01110
Biosynthesis of secondary metabolites
boe01230
Biosynthesis of amino acids
Module
boe_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
106336396
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
106336396
Enzymes [BR:
boe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
106336396
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-GeneID:
106336396
NCBI-ProteinID:
XP_013630678
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All DBs
Position
C3:complement(2632005..2634482)
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AA seq
493 aa
AA seq
DB search
MASATHLLSQPSSSLRRNLNQYQSNRSPLSRIPVLSLKSTLKPLQRLSVKAAASSPNSVK
TATKGSDDQSAFNHCFKKQSDGFLYCEGTKVEEIMESVERRPFYLYSKPQITRNVEAYKE
ALEGVSSVIGYAIKANNNLKILEHLRSLGCGAVLVSGNELRLALRAGFDPTKCIFNGNGK
LLEDLVLAAQAGVFVNVDSEFDLDNIVEASRISGKQVNVLLRINPDVDPQVHPYVATGNK
NSKFGIRNEKLQWFLDEVKAHPNELKLVGAHCHLGSTITKVDIFRDAAVLMVEYIDEIRR
QGFEVSYLNIGGGLGIDYYHAGAILPTPMDLINTVRELVLSRGLNLIIEPGRSLIANTCC
FVNHVTGVKTNGTKNFIVIDGSMAELIRPSLYDAYQHIELVSPTPPEAEVSKFDVVGPVC
ESADFLGKDRELPTPPKGAGLVVHDAGAYCMSMASTYNLKMRPPEYWVEDDGSITKIRHA
ETFEDHLRFFEGL
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagctactcacctcctctcccaaccttcatcatctctccgaagaaacctaaac
caataccaatcgaaccgatctcccctctccagaatcccggtcctgtctctcaagtcaacc
ttgaagccactgcaacgcctctccgtcaaagccgccgcatcatccccaaactctgtcaaa
accgcgacgaagggatcggacgatcagtccgcgttcaaccattgtttcaagaaacagtca
gatgggtttctctattgcgaggggactaaagttgaggagatcatggagagcgtcgagaga
agacctttttacttgtatagcaagcctcagatcactagaaacgtcgaggcttacaaagag
gccttggaaggtgtgagttccgtcattggctacgctattaaggctaataacaatctcaag
attttggagcatttgaggagtttgggatgtggtgctgtcctcgttagtggaaatgagctc
aggcttgctcttcgtgctggttttgatcccacaaagtgtatctttaatggaaatgggaag
ctgttggaggatttagttctcgctgctcaagcaggtgttttcgtgaacgttgatagtgaa
ttcgacttggataatatagtggaagcttcaagaatatctggtaaacaggtcaatgttctc
ctgcgtatcaatcctgatgttgatcctcaggtgcatccatatgtagctactgggaacaag
aactcgaagtttggtatcaggaacgagaagcttcagtggtttctcgatgaggtgaaggca
catcccaatgagcttaagcttgttggagctcattgccatctaggctctaccattactaag
gtggatatattcagagatgctgcggtactcatggtggaatacattgatgagatcaggcgt
caaggctttgaagttagctacttgaacattggtggtggcttagggatagattattaccat
gccggagctattcttcctacaccaatggatctcatcaacaccgtgagagagcttgttctg
tcacgtggactgaatctaataatagagccagggaggtcgctgattgcaaacacgtgctgt
ttcgtcaaccatgtgaccggtgtgaagacgaatggaactaaaaactttatagtgatcgat
ggaagtatggctgagctaatccgtcctagtctttatgatgcatatcagcatattgagttg
gtctctcctacaccacctgaagcagaggtttccaagttcgatgtagtgggtcctgtttgt
gaatctgctgatttcctgggcaaagatagagagcttcctactcctccaaagggagctggt
cttgtggttcatgatgctggtgcatactgtatgagcatggcttccacttacaatcttaag
atgcgtcctccagaatactgggttgaagatgatgggtcgatcactaagatcaggcacgct
gagacattcgaagaccatttgcgtttctttgaaggtctataa
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