KEGG   Brassica oleracea (wild cabbage): 106336459
Entry
106336459         CDS       T04124                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 2
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:boe03400]
    106336459
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    106336459
SSDB
Motif
Pfam: SNF2-rel_dom UBA_RAD5A Helicase_C HIRAN zf-C3HC4_3 zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 zf-RING_2 DEAD Prok-RING_4 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_5 ResIII zf-RING_4 zf-ANAPC11 GIP1_N
Other DBs
NCBI-GeneID: 106336459
NCBI-ProteinID: XP_013630749
UniProt: A0A0D3B2C3
LinkDB
Position
C3:complement(5517333..5522710)
AA seq 1024 aa
MGTKVSDHLLSTVRSVVGSDHSDMDIIRALHMANLDPTAAINIIFDTPSFSKPNDIAAAA
NPIPRAVNGGRRVEDGIKVCPFSEGAANHHRVEEEEDESVSGDECWWFVGCSELSGLSTC
KGRRLKAGDELLFTFPSSKALKSETTTPGKRFGRGRPSARNVSDIVRFSTKDSGEIGRIP
NEWAKCLLPLVRDKKVRIEGRCKSAPESLGIMDTILLSVSVYINSSMFQKHSATSLKVAS
NTAEESIFHPLPNLLRLLGLTPFKKAEFTPEDLSTRKRPLSSKDPVSTSLLQLNKVKKLN
QDAEGDENEHCISDGDLDNIVGVGDSSDLQEMETPRKLLCELRAYQKQALHWMTQLEKGN
CTDEAATMLHPCWEAYYLADKRDPVIYLNSFTGDATIHFPSTLQMARGGILADAMGLGKT
VMTISLMLAHSWKAASTGFQCPINEGDKGISSSVDESTSPSVKATKFPGFDKKLLEQQSA
LENGGNLIICPMTLLAQWKSEIEMHAKPGSLSVYLHYGPDRPKDVKLLTQSDVVITTYGV
LTSEFFAENSAKSEGLYAVRWFRIVLDEAHTIKNSKTQVSLAAAALVSDRRWCLTGTPIQ
NTLEDLYSLLRFLRIEPWGTWAWWNKLVQKPFEEGDERGLKLVQSILKPIMLRRTKSSTD
RDGRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVQQGKVLHNYASILELL
LRLRQCCDHPFLVMSRGDTAQYSDLNKLAKRFLGGKSCGLEKEGKDVLPSVAFVQEVVEE
LSKGEQGECPICLEAFEDAVLTPCAHRLCRECLLASWRNSSSGLCPVCRKTVSKQELITA
PTESRFQVDVEKNWVESSKITALLQELESFRSSGSKSIIFSQWTAFLDLLQIPLSRNNIS
FVRLDGTLNQQQREKVLKEFSEDGSIMVMLMSLKAGGVGINLTAASNAFVMDPWWNPAVE
EQAVMRIHRIGQTKEVKIRRFIIKGTVEERMEAVQARKQRMISGALTDQEVRSARIEELK
MLFT
NT seq 3075 nt   +upstreamnt  +downstreamnt
atggggacgaaagtttcagaccatctgctctccaccgtcagatcagtcgtgggctccgat
cactcagacatggacataatcagagcccttcacatggcgaatctcgatcccacggctgcc
atcaatataatcttcgacactcccagtttcagcaaacctaacgacatcgccgccgccgct
aatcctattccgagggcggttaatggagggaggagagtggaggacggcataaaggtctgt
ccttttagtgaaggagcagcgaatcatcatcgcgtggaggaggaagaagatgagagtgtt
tcaggggatgagtgttggtggttcgtgggctgttccgagttgtcgggattgtctacatgt
aaaggaaggagattgaaggctggtgatgagctgttgttcacgtttccgagtagtaaagcg
ttaaagtccgagactacgacgcctgggaagcgatttggaaggggaaggccaagtgcgcgt
aatgtttctgatatcgtcaggttctctacaaaggactcaggagagattggtaggatacca
aatgagtgggctaagtgtcttctaccgcttgtgagagacaagaaggttaggatagaaggg
agatgcaagtcggcgcctgaatcattaggcattatggataccattcttctttcagtaagc
gtatacattaatagttccatgtttcaaaagcatagtgctacatcacttaaggtagccagt
aatacggcagaggaatcgatattccatcctctcccaaacctcttgcggttactcggtttg
actccctttaagaaggcagagtttactcctgaggatttgtccactaggaagcgacctttg
agttccaaggatcccgtttctacttcgttgcttcaactaaacaaggtcaagaagcttaat
caagatgcagagggagatgaaaacgagcactgtatcagcgatggtgatcttgataacatt
gttggtgttggggacagttctgatttacaggaaatggaaactccacgtaaacttctgtgt
gagcttcgtgcttatcaaaagcaagcacttcactggatgacccaactggagaaaggaaat
tgcactgatgaggcagcaacaatgcttcacccatgttgggaagcatactatttagcagac
aagagggatcctgttatctacctgaactctttcactggtgatgctacaatacactttcct
agcacacttcaaatggcaagaggaggaattctagcagacgcaatgggtctcgggaagact
gtaatgaccatatcccttatgcttgcacattcatggaaagctgcctcaactgggtttcaa
tgccccattaatgaaggcgacaaagggatcagcagttctgtagatgagtctactagtcct
tcagtgaaggcaactaaatttccaggttttgataagaagcttctggaacagcaaagtgcc
cttgaaaatggtggtaacctaattatatgtccgatgacacttttagcccagtggaagtca
gagattgaaatgcatgctaagcctgggtccctatctgtatatcttcattacggccctgac
aggccaaaggatgttaaacttctaacccagagtgatgttgtcatcaccacatatggggtt
ctaacatccgaatttttcgcagagaactcagccaagagcgaaggactttatgcagttcgt
tggtttaggattgttcttgatgaggcacataccatcaaaaactcaaaaacccaagtatcg
ttggctgcagcagctttggtttctgatcgacgttggtgtcttacgggtactcctatccag
aatactttggaggatttatatagccttctacgatttttgaggattgaaccatggggaact
tgggcatggtggaataaacttgtccaaaagccatttgaagagggagatgagagagggcta
aagctagtacagtctattttaaaacctatcatgcttaggagaaccaagtctagcacagat
cgagatggacgaccgattcttgttctaccccctgctgatgcaagggtcatttactgtgag
ctctcggagtccgagagggatttctacgatgcgctgtttaaacgatcaaaggtgaaattt
gatcaatttgttcaacaagggaaagttcttcataactatgcttcgatcctggaactgctt
ctgcgtcttagacagtgttgcgatcacccatttctagtaatgagtcgaggtgatacagcg
cagtactctgatctgaataagctcgctaaacgttttctgggtggaaagtcttgtggtcta
gagaaggaaggcaaagatgtactaccatcagtggcttttgttcaggaggtggtagaggaa
ctgagcaaaggagagcaaggagagtgtccaatatgcctcgaagcgtttgaggatgcggtt
ttaacaccgtgtgctcatcgattgtgtcgtgagtgtctcttggcaagttggcgaaactct
tcttctgggttatgtcctgtgtgtaggaaaactgtaagcaaacaagaactcatcacagca
ccaacagaaagtagattccaggtggatgtggagaagaattgggtagaatcatcgaaaatc
actgctcttctgcaagagcttgaaagttttcgttcttcagggtctaagagcattatcttt
agccagtggactgcttttctcgatctcctccaaattcccctctctcggaacaacatttca
tttgtgcgtctggatggaacgctaaaccagcagcaaagagagaaagtccttaaagagttt
tctgaagatggcagtatcatggtaatgttgatgtctctaaaagctggtggtgttgggata
aatctaacagctgcgtccaatgcttttgtcatggatccatggtggaacccagcagtagag
gaacaagctgttatgcgtatccatcgtataggacagactaaggaagtcaaaatcagaaga
ttcatcattaagggaacagttgaggagaggatggaggcggttcaggcgaggaaacagaga
atgatctctggggctttaaccgatcaagaagtacgaagtgcacgtatagaggaactcaag
atgttgtttacctga

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