KEGG   Brassica oleracea (wild cabbage): 106336510
Entry
106336510         CDS       T04124                                 
Name
(RefSeq) probable geranylgeranyl transferase type-2 subunit beta isoform X1
  KO
K05956  geranylgeranyl transferase type-2 subunit beta [EC:2.5.1.60]
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:boe01006]
    106336510
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:boe04131]
    106336510
Enzymes [BR:boe01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.60  protein geranylgeranyltransferase type II
     106336510
Prenyltransferases [BR:boe01006]
 Protein prenylation
  Rab geranylgeranyltransferase
   106336510
Membrane trafficking [BR:boe04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    106336510
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
    106336510
SSDB
Motif
Pfam: Prenyltrans SQHop_cyclase_C SQHop_cyclase_N
Other DBs
NCBI-GeneID: 106336510
NCBI-ProteinID: XP_013630806
LinkDB
Position
C3:2765629..2768452
AA seq 249 aa
MSSTSSSFQMGELVADKHVRYILMTEKKKESFDSVMMDHLRMNGAYWGLTTLALFEKLSS
VSLDEVVSWLMTCQHESGGFAGNTGHDPHVLYTLISAVQILALFDKLDILDVGKVSSYIA
GLQNEDGSFSGDMWGEIDTRFSYISICCLSILKCLDKSNVKKAVDYIVSCKNRDGGFGCT
PGAESHAAQIFRCVGALAITGSLHHVDKDLLGWWLCERQVKSGGRDVIMGFVSGFLMGLK
KNVHLDSFS
NT seq 750 nt   +upstreamnt  +downstreamnt
atgagctctacgtcttcttcctttcagatgggtgagcttgtagctgacaagcatgttcgt
tacattctcatgacagaaaagaagaaagagagttttgactctgtgatgatggatcattta
aggatgaacggtgcatactggggactcaccactctagccttatttgagaagcttagctct
gtttccctagatgaagttgtttcatggctcatgacttgccagcacgaatctggtggcttt
gctggcaacactggacatgatccacatgttttatacacactgatcagtgctgtacaaatc
ttggccctctttgacaaactagacattcttgacgttggaaaagtatcaagctatattgct
ggtttgcagaatgaagatggatctttctcaggagatatgtggggagaaatagatacgagg
ttttcgtacatctctatatgctgtctgtcaatattgaaatgtcttgacaagagcaatgtg
aagaaggctgttgattacattgttagctgcaaaaaccgtgacggtggtttcgggtgcaca
cctggagctgaatcacatgcagcacagattttccgttgcgtgggtgctcttgctatcacc
gggagtcttcaccatgttgataaggacttgcttggttggtggttgtgtgagagacaagtc
aaatctgggggcagggatgttataatgggttttgttagcgggtttttaatgggtttaaaa
aagaatgtccatttagactcatttagttaa

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