Brassica oleracea (wild cabbage): 106336558
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Entry
106336558 CDS
T04124
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106336558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106336558
Spliceosome [BR:
boe03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
106336558
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Gene cluster
GFIT
Motif
Pfam:
Nop
Motif
Other DBs
NCBI-GeneID:
106336558
NCBI-ProteinID:
XP_013630865
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Position
C4:20050919..20053574
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AA seq
326 aa
AA seq
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MATLDDSFLADLDDLSDNEAEVDESDGDDGKDGEDIDMDMADLETLNYDDLDSVSKLQKS
QRYLDIMQKVEEALGKDSDGAEKGTVLEDDPEYKLIVDCNQLSVDIENEIAIVHNFIRDK
YRLKFQELESLVNHPIDYARVVKKIGNETDLTRVDLEGLLPSAIIMVVSVTALTTKGSPL
PEEVLQKTLEACDRALDLDSARKKVLNFVESKMGSIAPNLSAIVGSAVAAKLMGTAGGLS
ALAKMPACNVQVLGQKRKNLAGFSSATSQSRVGYLDQTEIFQSTPPALRMRAGRILAAKS
TLAARVDATRGDPSGTNGKALREEIR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcttgatgattctttcctcgcagaccttgatgacttatctgacaatgaagca
gaagtggatgagtctgatggtgatgatggaaaggatggagaagatattgacatggacatg
gcagacttagaaacccttaactacgatgatctcgattccgtttctaagctccagaaatcg
cagagatatcttgacattatgcagaaagtggaagaggctctgggaaaggattctgatgga
gctgagaaaggaactgtgctagaagatgatcctgaatacaagctaatcgtggattgcaac
cagctctcagttgacattgagaatgagattgccatcgtccacaacttcatccgtgacaag
tacagactcaagtttcaagagcttgaatcgctggtaaaccaccctattgattatgcccgc
gttgtcaaaaaaatagggaatgagacggatttaacacgtgttgatcttgaaggccttctt
ccatctgctattatcatggttgtttcagttactgccttaaccactaaagggagcccactg
ccagaggaggtcctgcagaagactctagaggcttgtgatcgagctctagatcttgattcc
gcaaggaagaaggttctcaactttgttgagagtaagatggggtctatcgcaccaaatctg
tccgccattgtcgggagtgcggttgcagctaagctcatggggactgctggaggtttgtca
gcgcttgctaaaatgcctgcctgtaatgttcaagttcttggccaaaagaggaagaacctt
gctgggttctctagtgcaacctcgcagtcccgcgtgggttatctggatcagaccgagatt
ttccaaagcacgcctcctgcgcttcggatgcgtgctggcaggatcttggctgcaaagtct
actttggcagcaagagttgatgctactaggggagacccatcaggaacaaatggaaaagct
ttgagggaagagatccgttag
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