Brassica oleracea (wild cabbage): 106336733
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Entry
106336733 CDS
T04124
Name
(RefSeq) chaperonin CPN60-like 1, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106336733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106336733
03110 Chaperones and folding catalysts [BR:
boe03110
]
106336733
03029 Mitochondrial biogenesis [BR:
boe03029
]
106336733
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106336733
Enzymes [BR:
boe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106336733
Messenger RNA biogenesis [BR:
boe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106336733
Chaperones and folding catalysts [BR:
boe03110
]
Heat shock proteins
HSP60 / Chaperonin
106336733
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106336733
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106336733
Exosomal proteins of other body fluids (saliva and urine)
106336733
Exosomal proteins of breast cancer cells
106336733
Exosomal proteins of colorectal cancer cells
106336733
Exosomal proteins of bladder cancer cells
106336733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Flavoprotein
Motif
Other DBs
NCBI-GeneID:
106336733
NCBI-ProteinID:
XP_013631117
UniProt:
A0A0D3BSH8
LinkDB
All DBs
Position
C4:<9899715..9903362
Genome browser
AA seq
583 aa
AA seq
DB search
MYRLVSSVASKARVARNCTTQIGSRLSATRNYAAKDIKFGVEGRALMLRGVEELADAVQV
TMGPKGRNVIIEQSWGAPKVTKDGVTVAKSIEFKDRVKNVGASLVKQVANATNDVAGDGT
TCATVLTRAIFTEGCKSVAAGMNAMDLRRGIKLAVDTVVTNLKSRARMISTSEEIAQVGT
ISANGDREIGELIAKAMESVGKEGVITIQDGKTLFNELEVVEGMKIDRGYISPYFITNQK
NQKCELEDPLILIHEKKISNLNSIVKVLELALKKQRPLLIVAEDLDSEALAVLILNKLRA
GIKVCAVKAPGFGENRKANLQDLAILTGAQVITEELGMNLEKVDLSLFGNCKKITVSKDD
TVFLDGAGDKKSISERCEQIRSMVEASESDYDKEKLQERLAKLSGGVAVLKIGGASESEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELEKLSTANFDQKIGVQIIQNALKT
PVYTIASNAGVEGAVVVGKLLESDDPDLGYDAAKGEYVDMVKSGIIDPVKVIRTALVDAA
SVASLLTTTEAVVTDIPTKEDASPAMGGGGGMGGMGGMGGMGF
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtataggctcgtctccagcgttgcttcgaaagctagagttgccagaaactgtacaact
cagattggaagcagactcagtgccactaggaactatgcagcaaaagacataaagttcggt
gttgaaggtcgtgctttgatgcttagaggtgtcgaggagcttgctgatgctgttcaagtc
actatgggacccaagggtcgtaatgtcatcatcgaacaaagctggggtgcgccaaaggtg
accaaggatggtgttactgtcgccaagagcattgagttcaaggacagagtcaagaacgtt
ggtgctagtcttgtcaaacaggttgctaacgccacaaatgatgtagctggtgatggaaca
acctgtgctacggttcttactcgagctatcttcacggaaggttgtaaatcggttgctgct
ggaatgaatgcaatggacctaaggcgtggaatcaaattggctgttgataccgtcgtcacg
aacttgaagagccgagcacgcatgattagcacttctgaggaaatcgctcaagttgggaca
atatcagctaatggagatagagaaattggtgaactgattgcaaaggctatggaaagtgtt
ggcaaagagggagtgatcacaattcaggatggaaagaccttgtttaacgagcttgaggtt
gttgagggtatgaagatcgacagggggtacatttccccgtactttattacaaaccagaag
aaccaaaaatgtgaacttgaagatcctctcattctcatccacgagaagaaaatctctaat
ttaaattctattgtgaaggtcttagaactggctctcaagaagcaaaggccattgctgatt
gttgcggaggatttggatagcgaggctcttgccgtgctaattctaaacaaacttcgtgct
ggaatcaaggtctgtgctgtgaaggcccctggttttggagaaaaccgaaaggccaactta
caggatctagctatcctcaccggagcccaggtaattacagaagagctaggtatgaatctc
gagaaagtggacctcagcttgtttggaaactgcaaaaagataactgtatccaaagacgac
actgttttccttgatggtgctggtgacaagaaatcaattagcgaacgatgtgaacagata
cgatccatggttgaagctagcgaatctgactatgacaaggagaagttacaagaaaggttg
gctaagctttctggaggtgttgctgtactaaagattggaggagcgagtgagtcagaagtt
ggcgaaaagaaggatagagtaactgatgctctaaatgccaccaaagcagcggtagaagag
ggtattgttccaggtggtggtgttgctcttttgtacgcgtcaaaagagctcgagaagctt
tccacagctaactttgatcagaaaatcggtgtccaaatcatccaaaacgctctcaagaca
cctgtttacacgattgcatccaacgctggagtagagggtgcagtcgtcgtaggcaagctt
ttggaatcagatgatcccgacctcggttacgatgctgctaaaggagagtacgttgatatg
gtgaagtctggtattatcgaccctgtgaaagtgatcagaaccgcattggttgatgctgca
agtgtcgcatctttgttgacaacgacggaagcagttgtgactgatattccaactaaagag
gatgcgtctccagctatgggcggtggtggcggcatgggtggtatgggaggtatgggagga
atgggtttctga
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