KEGG   Brassica oleracea (wild cabbage): 106336760
Entry
106336760         CDS       T04124                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein B'' isoform X1
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106336760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:boe03041]
    106336760
Spliceosome [BR:boe03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    106336760
 Complex B
    106336760
 Complex C
   U2 SnRNP specific factors
    106336760
SSDB
Motif
Pfam: RRM_1 RRM_5 DUF4523 DUF6445 RRM_YTH1
Other DBs
NCBI-GeneID: 106336760
NCBI-ProteinID: XP_013631143
UniProt: A0A0D3BTK6
LinkDB
Position
C4:13082276..13084107
AA seq 228 aa
MLTADIPPNQSIYIKNLNERIKKEELKRSLYCLFSQFGRILDVVALKTPKLRGQAWVAFS
DVTAATNAVRQMQNFPFYDKPMRIQFAKEKSDCIAREEGTFVPKDKKRKKEEKAERKREE
TQRPNTANGPTPQNGAPAPSSFKPSGQETMPPNNILFIQNLPHDTTTEMLEFLFRQYPGF
KEIRMVAAKPGIAFAEFEDDVKSSMAMQGLQDFKITPQYPMLISFAKK
NT seq 687 nt   +upstreamnt  +downstreamnt
atgttaacggcggatataccaccgaatcagtcaatctacatcaaaaacctcaatgaaaga
atcaagaaagaagaattgaagagatctctttactgtttgttctcacagtttgggaggata
cttgatgtggttgctttgaagactcctaagctccgtggccaagcttgggttgcctttagt
gatgtcactgctgctactaatgctgttcgccagatgcagaacttccctttctatgataaa
cctatgcgcatacaattcgcaaaagaaaagtcagattgtattgctagagaggaaggaact
ttcgttcccaaagataagaagaggaagaaagaagagaaagctgaaagaaagcgtgaagaa
acccaacgaccaaacacagctaatggcccaactccacagaacggagcccctgctccatcg
tcgttcaagccgagcggacaagaaacgatgccaccaaacaacatactcttcattcagaat
cttccgcacgatacaacaactgaaatgcttgagtttctcttccgtcagtatccgggattc
aaagagataagaatggtcgccgctaaaccagggattgcgtttgcggagttcgaagacgac
gttaaatcttccatggctatgcaaggtcttcaggacttcaaaatcactccccagtaccca
atgctcatctcttttgccaagaaatga

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