Brassica oleracea (wild cabbage): 106336765
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Entry
106336765 CDS
T04124
Name
(RefSeq) RNA polymerase I-specific transcription initiation factor RRN3-like isoform X1
KO
K15216
RNA polymerase I-specific transcription initiation factor RRN3
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106336765
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription initiation factors
106336765
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRN3
DUF1953
Motif
Other DBs
NCBI-GeneID:
106336765
NCBI-ProteinID:
XP_013631151
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Position
C4:complement(48390591..48394128)
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AA seq
619 aa
AA seq
DB search
MGASEVLTDPSSLYDVGNGEYSDTYTMLTVRNALASVQNGESDRYEELVQSMQIIKGADH
AVWADLVTILNALSGSVACIDIIHHRKLLSSVSFYYISHLLPKVSSLAIIMLQVFGMSLW
DLKPHVMDALVGLLISLAATSGKYLDSCLNMLIGHFVPPRWVIDRLSQRRVIDQKTDVLS
WVHGAILKISLLVPLAPSRLLPMLAQQMPKINKKDNLVVMYVENLFKLQSSPIGQVGGSM
IFMMVMERLRDLDLEIDWDDILQDDSSRGMFDMELEDTMNEGEENTSGGNVVFESLDKLM
VISFDHLESCNLDGRLDQVFEKLFGAFENFILNTYKSKVSQFLMFYACSLDPENCGVKFA
SKLMDIFLSSNKPRPTRMSAVAYLASYLARGKFLPVSFVASMLKRLVDECADYCGACNDD
IRPEAHQIFYSGCQAIMYVLCFRMRSILNVPLFRSQLIPLESVLMHRLNPLMVCLPSVVA
EFLKQAKAGGMFVVSDSFIFDDLLESELSRAFGGPERLDTFFPFDSCLLKSSNSYISPNF
IYWSMVRPTYEEDDDDEEDAEIIVNGDEESDEEEEEGDLDYSMNKMSITPKHSFKNKMER
DRLLKMPSMIRHSTSPESL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgggagcatcagaggttctaactgatccatcaagcctatacgatgtgggaaacggtgaa
tattctgacacgtatacgatgcttaccgtgagaaacgcacttgcatctgttcagaatgga
gaatcagaccgttacgaagagcttgttcaatctatgcagatcatcaaaggagctgaccat
gctgtgtgggcagatcttgtgactatcttgaacgcgttatcaggctctgtggcttgcata
gatatcattcaccatcggaagcttctttcttcggtaagtttctattacatctcccacctt
ttacctaaggtctcatccctggctattattatgttacaggtttttggaatgtcactgtgg
gatctcaaacctcatgtcatggatgcgttggtggggctactcatatcgctggctgctact
agtgggaagtatctggactcttgtctgaatatgctcataggccactttgttccaccgcgt
tgggtgattgatagactttcgcaacgccgtgtaatcgaccagaagacagacgttctttct
tgggttcatggagccattctgaagatctctcttttggttcctcttgctccctcgagattg
ttgcccatgctcgctcagcaaatgcccaaaataaacaaaaaggacaatctggtagtgatg
tatgtggagaatttattcaagttgcagagcagcccaatcgggcaagttggtggcagcatg
atttttatgatggtgatggagaggttgagagatttggatctggagattgattgggatgat
attctacaagatgactctagtagaggcatgtttgatatggaacttgaagacactatgaat
gaaggagaagagaatacgtctggtggaaatgttgtttttgagtctttggacaaattgatg
gtcatatcgtttgatcatcttgaatcatgtaatcttgatggtcgtttggatcaggtgttt
gaaaagctctttggggcatttgagaacttcattctgaatacatacaaatctaaagtttcg
cagtttctgatgttctatgcatgttcactggatcctgaaaactgtggtgtgaaatttgcg
agtaagctaatggacatttttctctccagcaacaagcctcgacctactaggatgagtgcg
gttgcctatctagctagctacttggctcgtggaaagtttttacctgtttcctttgtggcg
agcatgttaaaaaggttggtagatgagtgcgcggattactgtggagcttgcaatgatgat
attaggcctgaagcacatcagattttctactccggatgtcaggcgatcatgtatgtgctt
tgcttccggatgagatccatcctaaacgttcctctctttcggtcccagcttataccattg
gagtcagttttaatgcacagactaaacccattgatggtatgccttccatccgtagttgcg
gagttccttaagcaagctaaagcaggtggcatgttcgtagtctcagactccttcattttc
gatgacttactcgagtctgagctctcccgtgcgtttggcgggcctgagaggcttgataca
ttcttcccctttgactcttgcttgctgaaaagctctaacagctatatctccccgaatttc
atttactggtcgatggtgagaccgacctatgaagaagatgatgatgatgaggaggatgct
gagataattgtgaacggggatgaggagagtgatgaagaggaggaggagggtgatcttgat
tactccatgaacaagatgtccataacgcctaagcactctttcaagaacaagatggaaaga
gacagactactgaaaatgccttccatgatcagacattccactagtccagaatccttgtga
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