Brassica oleracea (wild cabbage): 106336779
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Entry
106336779 CDS
T04124
Name
(RefSeq) ubiquitin receptor RAD23d
KO
K10839
UV excision repair protein RAD23
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03420
Nucleotide excision repair
boe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106336779
09124 Replication and repair
03420 Nucleotide excision repair
106336779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
boe03051
]
106336779
03400 DNA repair and recombination proteins [BR:
boe03400
]
106336779
Proteasome [BR:
boe03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
106336779
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
106336779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Dsc3_N
TECR_N
UBA_3
UBA_RAD5A
CUE
Ubiquitin_5
Ubiquitin_4
SAP130_C
Motif
Other DBs
NCBI-GeneID:
106336779
NCBI-ProteinID:
XP_013631168
UniProt:
A0A0D3BZM5
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Position
C4:36155497..36158351
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AA seq
378 aa
AA seq
DB search
MKIFVKTLKGTNFEIEVNPADTISDTKRRIETHQGAQYPAAQQMLIHQGKVLKDETTLEE
NNVVENSFIVIMLSKAKVSSSGASTASAPAPAPQAQPAQTVATPQVAAPTVSVPEPTSVA
ATVAAPSAAAASTQTDVYGQAASNLVAGNTLESTVQQILDMGGGSWDRDTVVRALRAAFN
NPERAVEYLYSGIPSQAEIPPAPQAPATGGQAANPLAQEAAPVSATGGPNANPLDLFPQG
MPAADAGAGAGNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQAD
FLRLINEPVEGEENAMEQLEAAMPQAVTVTPEEREAIERLEAMGFDRAMVLEVFFACNKN
EELAANYLLDHMHEFEEQ
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttcgtcaagactctcaaggggaccaacttcgagatcgaagtgaatccggct
gatacgatctctgatactaagagaagaatagaaactcatcaaggtgcgcaatacccggcg
gctcagcagatgctaatccaccaaggaaaagttctcaaggatgagactacattggaagag
aacaacgttgtcgagaacagtttcattgtcatcatgttgtctaaggccaaggtttcttca
agcggggcatcaactgcctctgcgcctgcaccagcacctcaggctcagcctgcacagaca
gtagctacaccacaggtggctgctccaactgtctcagttccagagcctacaagtgtagct
gcaaccgttgcagcacctagtgctgctgctgcttcgacgcaaacagatgtgtatggtcaa
gcagcgtcaaaccttgttgctgggaatactctggagtccactgtccagcaaattcttgac
atgggtggaggtagttgggaccgtgacactgttgtccgagccctgagagccgcctttaac
aaccctgaaagggctgttgaatatctctactctggaatcccttctcaagctgaaatcccg
ccagcccctcaagccccagctactggtggacaggcagcaaatcctctagcacaagaagct
gctccagtttctgcaactggtggtccaaacgcaaatccattagacctgttccctcagggc
atgcccgcagcagacgctggtgctggagctggtaatcttgatttcctgcgtaacagtcaa
cagttccaagccctgcgagctatggtacaagcgaacccacaaattttacagcctatgctt
caggagctcggtaaacaaaacccgcagcttgtgcgtctaattcaagagcaccaggccgac
ttcctacgcttgataaatgaaccggtcgagggagaagagaacgccatggaacagttggaa
gcagccatgccacaagctgttaccgtcacacctgaagagcgtgaagccattgaacggctg
gaagcgatggggtttgatcgtgcgatggtcttggaggtgttctttgcgtgcaacaagaat
gaagaacttgcagctaactatcttctagatcacatgcacgagtttgaagaacaatag
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