Brassica oleracea (wild cabbage): 106336933
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Entry
106336933 CDS
T04124
Name
(RefSeq) cysteine protease ATG4b isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
106336933
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
boe01002
]
106336933
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106336933
03029 Mitochondrial biogenesis [BR:
boe03029
]
106336933
Peptidases and inhibitors [BR:
boe01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
106336933
Membrane trafficking [BR:
boe04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
106336933
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
106336933
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Peptidase_C78
Motif
Other DBs
NCBI-GeneID:
106336933
NCBI-ProteinID:
XP_013631371
UniProt:
A0A0D3BWS7
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All DBs
Position
C4:26619469..26622610
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AA seq
430 aa
AA seq
DB search
MKAMCDRFLPSKCSSSSTADEKRDRSTLNGWTVIVNTASSMASGAIRRFQDRVLGPSRTG
IPSTTSEIWLLGVCYKISEAESSEEADAGSVLDAFRQDFSSLILITYRRGFEPIGETTYT
SDVGWGCMLRSGQMLFAQALLFQRLGRSWRKKESEPSEEEYLEILELFGDSGASAFSIHN
LILAGESYGLAAGSWVGPYAVCRSWESLARKKREETDVEHCSCSMAVHIVSGSEDGERGG
APILCIEDVTKTCLEYSEGETEWASVLLLVPLVLGLDKVNPRYIPSLIATFAFPQSLGIL
GGKPGASTYIVGVQEDKGFYLDPHDVQQVVTVNKETKDADTSSYHCNTLRYVPLESLDPS
LALGFYCRDKDDFDDFCIRATKLAGDANGAPLFTVTQSHRGGERGIAETRSVASSTEISG
EEHEDDWQLL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaaggctatgtgtgatagatttcttccttcaaaatgttcttcatcatcaaccgcagat
gagaaacgtgatagatccacacttaacggttggacagtaattgtaaacacagcttcttct
atggctagtggggcgattaggaggtttcaagatcgtgttttagggccgagtaggaccggt
attcccagcactacaagtgagatatggctactgggtgtctgttataaaatctcagaagct
gaatcctcagaagaagcagatgctggcagtgtattggatgctttcagacaagacttttcg
tccttgatattaataacatatcgtagaggttttgagcctattggagagacaacgtatact
agtgatgttggatggggttgtatgcttcgaagcggacaaatgctctttgcacaggcattg
ctatttcaaaggctgggaaggtcttggaggaaaaaggaatctgagccgtctgaagaggaa
tacttagagatcttagaactttttggtgattctggggcttcggcgttctccattcacaat
cttatactagccggagaatcttatggcttggctgctgggtcatgggtaggaccatatgct
gtttgtagatcatgggagtcattagccaggaagaaaagagaagaaactgatgttgaacac
tgttcgtgttccatggctgttcatatcgtttctggcagcgaagatggagagagaggtgga
gctccaattctctgtatagaagatgtcaccaaaacttgtttggaatattcagaaggagaa
actgaatgggcttcagttcttctcttggtcccactggttcttggacttgacaaagtgaac
ccaaggtacattccatctttgatagctactttcgctttccctcaaagcctgggaattttg
ggaggcaaaccaggtgcatcgacttacatagttggagttcaagaagacaaaggtttctac
cttgatccacacgatgttcaacaggtagtgacagtgaacaaagaaactaaagatgctgac
acatcgtcttaccattgcaatactcttcgttatgttccgttggagtcgctagacccgtcc
ctagctcttggattctattgccgggacaaagatgattttgatgatttttgtatacgagca
acgaagctagcaggagacgccaacggcgctccattgttcacggtgactcaatctcacaga
ggtggtgagcgtgggattgcagaaacccgctctgtggcatcatctacagagatatctggt
gaggagcatgaagatgactggcaattactttga
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