Brassica oleracea (wild cabbage): 106337034
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Entry
106337034 CDS
T04124
Name
(RefSeq) protein EXPORTIN 1B
KO
K14290
exportin-1
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03008
Ribosome biogenesis in eukaryotes
boe03013
Nucleocytoplasmic transport
boe03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106337034
03008 Ribosome biogenesis in eukaryotes
106337034
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
106337034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106337034
03009 Ribosome biogenesis [BR:
boe03009
]
106337034
03016 Transfer RNA biogenesis [BR:
boe03016
]
106337034
03036 Chromosome and associated proteins [BR:
boe03036
]
106337034
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
106337034
Ribosome biogenesis [BR:
boe03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
106337034
Pre-60S particles
106337034
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
106337034
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
106337034
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
Mesothelin
Motif
Other DBs
NCBI-GeneID:
106337034
NCBI-ProteinID:
XP_013631538
LinkDB
All DBs
Position
C1:complement(43100603..43107839)
Genome browser
AA seq
1079 aa
AA seq
DB search
MAAEKLRDLSQPIDVTLLDATVESFYATGSKDERAAADNILRELKANPDTWLQVVHILQS
TRSAHTKYFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVQLSGDEGSFRAERLYVNK
LNVILVQIVKHEWPAKWRSFIPDLVKAAKTSETLCENCMAILKLLSEEVFDFSKGEMTQQ
KIKEMKESLNSEFLLIHELCLYVLSASQRPELIRSTLSALHAYLSWIPLGYIFESPLLET
LLKFFPEPAYRNLTLQCLSEVAALNCGDFYNGQYVKMYGIFMGQLQAMLPLNINIPEAYS
NGSDEEQAFIQNLALFFTSFFKSHIKVLESPEIISLLLVGLEYLISISYVDDTEVFKVCL
DYWNSLVSELFTLHHHVGHPGLTPSLFGLQMACLPRTAGSIKPEVTERQKLYADSLSKLR
GLMISRMAKPEEVIIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLGHDDTERQML
SKLSKQLSGEEWTWNNLNTLCWAIGSISGSMDVDQENRFLVMVIRDLLNLCEIIKGKDNK
AVIASNIMYVVGQYSRFLRAHWKFLKTVVHKLFEFMHETHPGVQDMACDTFLKIVLKCKR
KFVILQVGEEEPFVSELLSGLVTIVGDLEPHQIHTFYESVGSMIQAETDPQKRSEYIQRL
MDLPNQKWTEIIGQARQNADILKDPDMIRTVLSILQTNTRVATSLGTHFLSQISLIFLDM
LNVYRMYSELVSSNIAEGGPYASRTSVVKLLRSVKREILRLIETFLEKAEYQSHIGKQFV
PPMMDPVLGDYARNVPDARESEVLSLFATIINKYKVNMQDEVPRIFEAVFQCTLEMITKN
FEDYPEHRLKFFSLLRAIATFCFPALVQLSSEQLKLVMDSVIWAFRHTERNIAETGLNLL
LELLKKFQKSDFSNQFYRTYFMQIEQEIFAVLTDTFHKPGFKFHVLVLQHLFSLVESKSL
TEPLWDASTVLQQYPNNAAFVLEYTIKLLSSSFPNMTTAEVTQFVNGLYESRSDIARFKN
NIRDFLVQSKEFSAQDNKDLYAEEAAAQIERDIQNMLLIPGLIAPNEIQDDMADSYTIS
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgagaagttacgcgacttgagtcagcctatcgacgtcactttgctcgacgct
accgttgagtccttctacgcaacgggatcgaaggatgaaagagctgctgcggataacatc
cttcgtgaattgaaagcgaaccctgacacgtggcttcaagtggttcacattttgcaaagc
accaggagtgcacataccaagtactttgcgcttcaggtgctggaaggtgttatcaaatat
aggtggaatgctttacctgttgagcagcgtgatggaatgaagaattacatctctgaagtc
atcgtgcagctctcaggggatgaaggatctttcagagcggaaaggctttatgtcaacaag
ttaaatgtcattctggttcagatcgttaaacatgagtggcctgctaagtggaggagcttt
attcccgatctagtcaaagctgccaaaactagcgagactttatgtgagaattgcatggct
attttgaagctcctgagcgaagaggtatttgatttctcaaaaggagagatgactcagcaa
aagataaaggagatgaaagagtccctaaacagcgagtttctactcattcatgagttatgc
ctatatgttctctcagcttcccaaagaccagagcttatacgctcaacgctctctgcattg
catgcctatctttcttggattccgcttggctatatattcgagtcacccttgctggagacc
ctccttaaattcttccctgagccggcatataggaatctcacccttcaatgtctgtcagag
gttgcagctcttaattgtggggacttctacaatgggcaatatgtcaagatgtacggcatt
ttcatgggacagttgcaggcaatgcttcctttaaatatcaatatcccagaggcatattca
aatggaagtgacgaagaacaggcttttatccagaacttggcactgttcttcacttcattt
ttcaagtcacatataaaagtcctagaatcacccgagattatttctttactacttgtgggt
ctggaatatctcattagcatttcatatgttgatgacactgaagtattcaaggtttgtttg
gactattggaattcactagtttcggagttatttacgttgcatcatcatgtcggccaccct
ggtctaactccaagtctgtttggattgcaaatggcttgccttcctcgtacggctggtagc
atcaaaccggaagtcacagagcgacaaaaactttatgctgattcattgtcaaaattaagg
gggctcatgattagtcgtatggctaagcctgaagaagtgataattgttgaagatgaaaat
gggaatatagtccgtgaaactatgaaggataatgatgttcttgtccaatataagataatg
cgggagacattaatctatctctcgcaccttggtcatgatgataccgaaagacagatgttg
agtaagctaagcaaacagttgagcggggaggaatggacatggaacaatctgaacacttta
tgctgggctattggatctatttctggttccatggatgtggaccaggaaaacagatttctg
gtgatggttattcgtgatttgttaaatttatgtgaaatcatcaagggaaaagacaataaa
gctgttattgcaagcaacatcatgtatgttgttggacagtactcgaggttcttaagggct
cactggaagtttctgaaaacagttgttcataagttgtttgaattcatgcatgagacacat
cctggtgttcaggacatggcgtgtgatacattcttgaaaattgttctaaaatgcaagcgc
aaattcgttattcttcaggttggagaggaggagccatttgtatctgaacttttgtcagga
cttgttactattgttggagatcttgaacctcatcagattcacaccttttacgaatctgtt
ggtagtatgatccaggcggaaacagatcctcagaagaggagtgaatatatccagaggttg
atggatctccctaatcagaaatggacagaaattataggacaagcacgtcagaatgcagat
atccttaaagacccagatatgatacgtactgtacttagtatcctccagacaaacacgaga
gttgcaacttcactaggaacacatttcttatctcaaatctcgttgatcttcttggatatg
ctgaatgtttatagaatgtacagtgaactcgtgtcgagcaacattgctgagggtggccct
tatgcttcgaggacatctgttgttaaacttctaagatctgttaagagagaaatccttagg
ttgatagaaacgtttctagagaaagcggaataccagtcacacattggcaaacagtttgtt
ccaccaatgatggatccagttcttggtgactatgcaagaaacgttcccgatgcaagggaa
tcagaagtcttatcactctttgcgacaataataaacaagtacaaggttaatatgcaagat
gaagtgcctcgcatttttgaagctgttttccagtgcactttggagatgatcacgaagaat
ttcgaagattatccagagcaccgcctcaagtttttctcgttacttcgtgctattgcgact
ttttgtttccctgctttggtacagttgtcaagtgagcaactgaagctagtgatggattca
gttatctgggcgtttaggcataccgaaagaaacatcgctgaaacagggcttaatctcttg
ctggagctgctgaaaaagtttcagaaatctgacttctctaaccaattctaccggacatac
ttcatgcaaattgagcaagagatattcgccgtcttgaccgataccttccacaagccaggg
ttcaagtttcatgtgttggtgctacagcatctattttccctggttgagagcaaatctttg
acggaacctttgtgggatgcttcgacagtacttcagcaatacccaaacaatgctgccttt
gttcttgaatacaccatcaagcttctaagctcatcattcccaaacatgactacagcagag
gtgacgcaatttgtgaatggactttacgagtcgagaagtgacattgcgagattcaagaat
aacatacgagacttccttgtacagtccaaggaattctctgctcaggataacaaagatcta
tatgctgaagaagctgctgctcaaattgagagagatatacaaaatatgcttttgattcct
ggtcttattgctccaaacgagattcaagacgacatggctgattcatacactatttcttag
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integrated database retrieval system
