Brassica oleracea (wild cabbage): 106337043
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Entry
106337043 CDS
T04124
Name
(RefSeq) putative cyclic nucleotide-gated ion channel 15
KO
K05391
cyclic nucleotide gated channel, plant
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106337043
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
boe04040
]
106337043
Ion channels [BR:
boe04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106337043
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
106337043
NCBI-ProteinID:
XP_013631510
UniProt:
A0A0D3BU81
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Position
C4:complement(15338214..15342140)
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AA seq
684 aa
AA seq
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MGYGNSRSVRFEEDSEVTKPQAVHEETAEKLKFKINGAQISPRKNVKKMTRGKSFKAKVL
SRVFTEDLGRVKNKILDPRGQTIRRWNKLFLIACLVSLFVDPLFFFLPVMRKEACITIGI
RLEVVLTVIRSLADAFYIAQIVIRFRTAYIAPSSRVFGRGELVIDSRKIAWRYLNKSFWI
HLVAALPLPQVLIWIVIPNLRGSPMTNTKNTLRFIIIFQYVPRMFLIFPLSRQIIKATGV
VTETAWAGAAYNLMLYMLASHVLGACWYLLAVERQEACWRHACNIEKTICQYRFFECRRL
EDPQRNSWFEWSNITTICKPGTRFYEFGIYGDAVTSTVTSSNFINKYFYCLWWGLKNLSS
LGQNLSTSTYVGEIIFAVVMATLGLVLFALLIGNMQTYLQSTTMRLEEWRIRRTDTEQWM
HHRQLPPELRQAVRKYDQYKWLATRGVDEEALLISLPLDLRRDIKRHLCFDLVRRVPLFD
QMDERMLDAISERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCL
IGPGDFCGEELLTWALDPRPVVILPSSTRTVKAIYEVEAFALRADDLKFVATQFRRLHSK
QLKHKFRFYSHQWRTWAACFIQAAWRRHKKRKYATELRVKEEFQCMFETASMVRLNSGKF
TRSGSDSGMVSSIQKPVEPDFSSE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgggttatggtaactcaagatctgtgagatttgaggaagattcagaagtaacaaagcca
caagctgtacatgaagaaactgcggaaaagctcaagttcaaaatcaatggagctcaaatc
tctcctagaaaaaatgtaaagaagatgactagagggaagtcttttaaagctaaagtactc
tccagagtgttcactgaggatcttgggagagttaaaaacaaaatactcgatcctcgtgga
caaacaataagaagatggaacaagctctttctcatagcatgtttggtttctctgttcgtg
gatcctctgtttttcttcttaccggtcatgagaaaagaggcttgtatcaccattggaatc
agactcgaagttgttctcacggttattagatctttggctgatgctttctacatcgctcag
attgttatacggtttagaacggcttacatcgccccttcttctcgtgtattcggtagagga
gagcttgtgattgattcaagaaagattgcttggaggtatctcaacaaaagcttctggatt
catttggttgctgctttgcctttacctcaggtgttgatttggatcgtaataccaaatcta
agaggctcaccaatgacaaacaccaaaaacactcttagattcatcatcatattccagtat
gttccaaggatgttccttatattccctctctctcgccagatcattaaagccactggtgtt
gtaactgagactgcttgggcaggagccgcctacaacctcatgctatatatgctagcaagc
catgttttaggtgcttgttggtacttgcttgcagtagagaggcaagaggcttgctggaga
catgcttgcaatatcgagaaaacgatttgtcaatacagattcttcgagtgcagaaggctt
gaagatcctcaaaggaactcttggttcgaatggagcaacataacaactatatgcaaacct
ggaactaggttttacgagtttggtatatacggagatgcagtaacttcaactgttacttca
tcaaacttcataaacaagtacttctactgtctctggtggggactgaagaacctcagttcc
ttgggacaaaatctatccacgagcacttacgttggtgagattatcttcgctgttgtcatg
gcgactctagggcttgtcctctttgcattgcttattggaaatatgcaaacatatttacag
tcaacaaccatgagactcgaagaatggaggataaggaggacagatacagagcaatggatg
caccataggcagcttcctccagagctaagacaagccgtgagaaaatatgatcaatacaag
tggttagccacaagaggagtcgatgaagaagctttattgataagtcttcctcttgatctc
cgaagagatatcaaacgccatctatgttttgatcttgttcgacgtgttccgctgttcgat
caaatggacgaaagaatgcttgacgcgatcagcgagaggctaaaaccggctttatgcact
gaaggtacgtttcttgtgagagaaggcgacccagttaacgaaatgctcttcataatcaga
ggccatcttgattcttacacaacaaatggaggcagaaccgggttcttcaactcttgtctc
ataggaccaggagatttctgtggcgaggagttgcttacttgggcgttagatcctcgtccc
gttgtgatcttaccgtcttccacacgcaccgtcaaagccatttacgaggttgaagccttt
gctttgagagctgatgatttgaagttcgtggctacacagtttaggagattacatagtaag
cagttgaaacataagtttaggttttactctcatcaatggagaacttgggcggcttgtttc
atacaggctgcttggagacggcacaagaagaggaagtatgcgactgagctgagggttaaa
gaggagtttcaatgtatgtttgagacggcctcgatggttaggctaaacagtgggaagttt
actcgtagtgggtcggattctggtatggtatcttcaattcagaaaccagtagaaccggat
ttttctagtgaatga
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