Brassica oleracea (wild cabbage): 106337369
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Entry
106337369 CDS
T04124
Name
(RefSeq) probable galacturonosyltransferase 5 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00520
Amino sugar and nucleotide sugar metabolism
boe01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
106337369
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
boe01003
]
106337369
Enzymes [BR:
boe01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
106337369
Glycosyltransferases [BR:
boe01003
]
Polysaccharide
Structural polysaccharide
106337369
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
106337369
NCBI-ProteinID:
XP_013631921
UniProt:
A0A0D3C353
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Position
C4:complement(45961462..45965142)
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AA seq
611 aa
AA seq
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MNQIRRWRRILILSLLLLSVVTPIVFLSNRIKSITSVDRGEFIEEVSDIRYKTNDDLRLT
AFEQDGEGFKEPKRILKDDELNPVVRSSVSNKSHDGSQSSERDKTLVLSEMSEGNSNKTK
EEQALVSQQTTVSSDTAEKISAKDIQASPKTKFQRPLAKSEKTSRAQLGPATDDRIKEIR
DKIIQAKAYLNLALPGNNSQIVKELRVRTKELERAVGDATKDKHLSKSSPQRLKAMELAL
YKVSRVFHNCPAIATKLHAMTYKSEEQARAQKKQAAHLMHLAARTTPKGLHCLSMRLTTE
YFTLDHERAKPFQQSYINPDLYHYVVFSDNVLACAVVVNSTISSSKDPGKIVFHVVTDSL
NYPSISMWFILNPVSRATIQILNIDDMNVLPLDHAQLLMKQNSSDPRVISALNHARFYLP
NIFPGLDKIVLFDHDVVVQRDLSRLWSLDMNGKVVGAVETCHKGEPSYIAMDTLINFSDA
WVAEKFDPKACTWAFGMNLFDLKEWRRQNLTSVYLNYFNQGIKRHLWKAGSLPLGWLTFF
GQAIPLEKRWNVVGLGHESGVKAGDIEEAAVIHYDGIMKPWLDIRIDKYKRYWNIHVPYH
HPYLQRCNIHD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaatccgtcgctggcggaggattttgatcctctctctgctactgctatccgtc
gttactccgattgtcttcctctcgaatcggatcaagagcatcacttccgtcgatagagga
gagttcattgaagaagtgtctgacattagatacaagacgaatgatgatcttagacttacc
gcctttgaacaggatggagaaggcttcaaggagcctaaacgaattctgaaggatgatgag
ttgaatcctgtggttaggtctagtgtttctaataaaagtcatgatggttcgcagtctagt
gagcgagacaaaacacttgttctctcagaaatgagtgagggaaacagtaacaaaaccaag
gaggagcaagcattagtttcacagcaaaccactgtaagctctgatacagcggagaaaatt
tcagcaaaagatattcaagctagtcctaaaaccaagttccagcgccctttggctaagagc
gaaaagacttcaagggctcagcttggaccagcaacagatgataggataaaggagatcaga
gacaaaatcatccaagctaaagcctatctgaatttggcccttcctgggaataactcccaa
atagtgaaggagttgagagttcgaacaaaagagctggaacgggctgtcggtgatgccacc
aaagacaaacatttgtcaaagagctcccctcaaagactgaaggccatggagcttgcatta
tacaaagtcagtcgggtctttcacaattgccctgccatcgctaccaaactccatgccatg
acttataaatccgaagaacaagctcgggcgcagaagaagcaagcagcacatttaatgcac
cttgcagcaaggactaccccaaaaggacttcactgcctctcaatgcgtttgacaacagaa
tactttaccttggatcatgaaagagcaaagccttttcagcaaagttatatcaatcctgat
ctctaccattacgttgtcttctctgacaatgttttggcctgtgcggttgttgttaactct
acaatttcctcgtcaaaggacccgggaaagatagtattccatgttgtgacggattcactc
aattacccatcaatctcaatgtggtttattttaaacccagttagcagagcaacaatccaa
atcctaaacattgatgatatgaatgtcctgcctttagaccatgctcaattgctgatgaag
caaaactcaagtgatccgcgagtcatttcagcgctcaaccatgcacgcttctatctcccg
aatattttcccaggtctggacaagatcgtattgtttgaccatgatgtagtagttcagaga
gacctaagtagactatggagcctcgatatgaatgggaaagttgttggagctgtagagact
tgtcacaaaggtgaaccttcatatattgctatggacacactcataaacttctcagatgca
tgggttgccgagaaatttgaccctaaggcttgcacttgggcgtttgggatgaatctgttt
gatctcaaagaatggagaagacagaatctgacatctgtgtacctgaactacttcaaccag
ggaataaaaagacatctctggaaagcggggagcttgccactaggttggttgacattcttt
gggcaagcgataccattggagaagagatggaatgtggttgggttaggacacgaatcagga
gtcaaagcaggagacatcgaagaagcagcggttatacactacgacgggatcatgaagcca
tggctggacatcaggatagacaaatacaagcggtactggaacatacatgtaccttaccat
cacccatacttgcaacggtgcaacattcacgattga
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