KEGG   Brassica oleracea (wild cabbage): 106337427
Entry
106337427         CDS       T04124                                 
Name
(RefSeq) novel plant SNARE 11
  KO
K08494  novel plant SNARE
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:boe04131]
    106337427
Membrane trafficking [BR:boe04131]
 SNARE
  SNAP-25[N] (Qb)
   NPSN
    106337427
SSDB
Motif
Pfam: Sec20 V-SNARE_C Prominin MCPsignal DUF3535 Cauli_AT Syntaxin_2 Laminin_II Med11 Occludin_ELL DUF948 Vps53_N DUF5740 Endotoxin_N JAKMIP_CC3 ING TMPIT DUF3450 Zw10_N Wtap ANIS5_cation-bd
Other DBs
NCBI-GeneID: 106337427
NCBI-ProteinID: XP_013631985
UniProt: A0A0D3C492
LinkDB
Position
C4:48551789..48554198
AA seq 262 aa
MDLSAVSEELAEIEGQINDLFRALSNGFQKLEKIKDASRQSRQLEELTDKMRDCKSLIKD
FDREVKSLESGNDASTNRMLNDRRQSMVKELNSYVALKKKYSSNLASNNKRVDLFDGPAE
DHMEENVLLASNMTNQELVNKGNSMMDDTDQAIERGKKIVQETINVGTDTSAALKAQTDQ
MSRVVNELDSIHFSLKKASKLVKEIGRQVATDKCIMAFLFLIVIGVIAIIIVKIVNPNNK
DIRDIPGLAPPAMNRRLLWNHY
NT seq 789 nt   +upstreamnt  +downstreamnt
atggatctatcggcggttagcgaagagcttgctgagatcgagggacaaatcaatgacctt
ttccgcgctttgtcaaatggattccagaagctggagaagatcaaagatgccagtaggcag
agcaggcagctggaagaactcactgacaaaatgcgtgactgcaagagccttattaaagat
ttcgatagggaagtcaaaagcttggaaagtggaaatgacgccagcactaaccggatgttg
aacgatagacgacagtctatggttaaggaactgaactcatatgttgctcttaagaagaaa
tactcatccaatctagcgagcaataataagcgagtagatcttttcgatggtcctgctgaa
gaccacatggaagagaatgtcttattagcttcaaatatgaccaatcaagaacttgtgaat
aaagggaactccatgatggatgacactgatcaagccattgaaagagggaaaaagattgtt
caagagactataaatgtgggaacagatacttcagcagctctcaaggctcagaccgaccaa
atgagtagagttgtcaatgaactcgattctattcatttctcactcaagaaagcgtccaag
ctggtcaaggaaattggtaggcaggttgccacagacaaatgtattatggcgtttcttttc
cttattgtcattggtgtcatagcaatcatcatcgtcaagattgtgaacccaaacaacaaa
gacatccgggacataccgggcctagctccaccagccatgaacagacgtttactctggaac
cattactga

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