Brassica oleracea (wild cabbage): 106337427
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Entry
106337427 CDS
T04124
Name
(RefSeq) novel plant SNARE 11
KO
K08494
novel plant SNARE
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106337427
Membrane trafficking [BR:
boe04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
106337427
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
Prominin
MCPsignal
DUF3535
Cauli_AT
Syntaxin_2
Laminin_II
Med11
Occludin_ELL
DUF948
Vps53_N
DUF5740
Endotoxin_N
JAKMIP_CC3
ING
TMPIT
DUF3450
Zw10_N
Wtap
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
106337427
NCBI-ProteinID:
XP_013631985
UniProt:
A0A0D3C492
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Position
C4:48551789..48554198
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AA seq
262 aa
AA seq
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MDLSAVSEELAEIEGQINDLFRALSNGFQKLEKIKDASRQSRQLEELTDKMRDCKSLIKD
FDREVKSLESGNDASTNRMLNDRRQSMVKELNSYVALKKKYSSNLASNNKRVDLFDGPAE
DHMEENVLLASNMTNQELVNKGNSMMDDTDQAIERGKKIVQETINVGTDTSAALKAQTDQ
MSRVVNELDSIHFSLKKASKLVKEIGRQVATDKCIMAFLFLIVIGVIAIIIVKIVNPNNK
DIRDIPGLAPPAMNRRLLWNHY
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggatctatcggcggttagcgaagagcttgctgagatcgagggacaaatcaatgacctt
ttccgcgctttgtcaaatggattccagaagctggagaagatcaaagatgccagtaggcag
agcaggcagctggaagaactcactgacaaaatgcgtgactgcaagagccttattaaagat
ttcgatagggaagtcaaaagcttggaaagtggaaatgacgccagcactaaccggatgttg
aacgatagacgacagtctatggttaaggaactgaactcatatgttgctcttaagaagaaa
tactcatccaatctagcgagcaataataagcgagtagatcttttcgatggtcctgctgaa
gaccacatggaagagaatgtcttattagcttcaaatatgaccaatcaagaacttgtgaat
aaagggaactccatgatggatgacactgatcaagccattgaaagagggaaaaagattgtt
caagagactataaatgtgggaacagatacttcagcagctctcaaggctcagaccgaccaa
atgagtagagttgtcaatgaactcgattctattcatttctcactcaagaaagcgtccaag
ctggtcaaggaaattggtaggcaggttgccacagacaaatgtattatggcgtttcttttc
cttattgtcattggtgtcatagcaatcatcatcgtcaagattgtgaacccaaacaacaaa
gacatccgggacataccgggcctagctccaccagccatgaacagacgtttactctggaac
cattactga
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