Brassica oleracea (wild cabbage): 106337451
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Entry
106337451 CDS
T04124
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINAT1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106337451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106337451
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106337451
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
106337451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_TRAF
Sina_RING
zf-C3HC4_3
zf-C3HC4_2
zf-Di19
zf-RING_6
Prok-RING_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
106337451
NCBI-ProteinID:
XP_013632010
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All DBs
Position
C4:complement(51723858..51726477)
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AA seq
268 aa
AA seq
DB search
MLSKKPLESNSTGLDYEVKMSKVEANNKPARSGNASIGKHGLHSSNGVYELLECLVCTNL
MYPPIYQCPNGHTLCSNCKLKVHNTCPICRYELGNIRCLALEKVAESLEVPCRYQKLGCH
DIFPYYSKLKHEQHCRFRSYNCPYAGSECSVTGDIQTLVDHLKDDHKVDMHDGCTFNHRY
VKSNPHEVENATWMLTVFNCFGRQFCLHFEAFQLGTAPVYMAFLRFMGDEKEAKKFSYSL
EVGAHSRKLTWQGIPRSIRDSHRKVRDS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgctttcaaagaagcccctagaatccaactcaacaggcttagattatgaggttaagatg
tctaaagtggaagctaacaacaaaccagcaagatcaggtaatgcctccattggaaaacat
ggactccattcaagcaatggtgtctatgagctcctcgaatgtctagtttgtacaaatctt
atgtatcctccaatttatcagtgccctaatggccacacactgtgctcaaactgcaaactg
aaagtgcacaacacgtgccctatatgccgctacgagctcggcaacataagatgcttggcg
ctcgagaaagttgcggaatctttagaagttccatgccggtaccaaaagttagggtgtcac
gacattttcccgtactacagcaagctcaagcacgagcagcactgcaggtttcgatcatac
aactgtccctacgctggctccgagtgttcggtgaccggtgatattcaaacccttgttgac
catctcaaagatgatcataaagtcgatatgcatgatggttgcactttcaaccaccgttat
gtcaagtcgaatccacacgaggttgagaatgctacgtggatgcttacggttttcaactgt
tttggaagacagttctgcttacactttgaggcatttcagcttgggacggcaccagtgtac
atggcgtttctaaggttcatgggagacgagaaggaggctaagaagtttagttacagcttg
gaagttggagctcacagccgtaaactgacgtggcaagggattccgagaagcatcagagac
agtcacaggaaagtcagagatagttag
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