Brassica oleracea (wild cabbage): 106337800
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Entry
106337800 CDS
T04124
Name
(RefSeq) DNA-directed RNA polymerase II subunit 2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03020
RNA polymerase
boe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
106337800
09124 Replication and repair
03420 Nucleotide excision repair
106337800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
boe03021
]
106337800
03400 DNA repair and recombination proteins [BR:
boe03400
]
106337800
Enzymes [BR:
boe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
106337800
Transcription machinery [BR:
boe03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
106337800
DNA repair and recombination proteins [BR:
boe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
106337800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-GeneID:
106337800
NCBI-ProteinID:
XP_013632372
LinkDB
All DBs
Position
C4:complement(1165453..1171352)
Genome browser
AA seq
941 aa
AA seq
DB search
MEYNNEYEKDPNYMEEEDEEEEITQEDAWAVISAYFEEKGLVRQQLDSFDEFIQNSMQEI
VDESADIEIRPESQHNPGHQSDFTETIYKISFGQIYLSKPMMTESDGETATLFPKAARLR
NLTYSAPLYVDVSKRVIKKGHDGEEVTETQDFTKVFIGKVPIMLRSSYCTLFQNSEKDLT
ELGECPYDQGGYFIINGSEKVLIAQEKMSTNQVYVFKKRQPNKYAYVGEVRSMAENQNRP
PSTMFVRMLARANAKGGSSGQYIRCTLPYIKKEIPIIIVFRALGFVADKDILEHICYDFA
DTQMMELLRPSLEEAFVIQNQLVALDYIGTRGAPPGAPKEKRIKYARDILQKELLPHVGV
GEFCETKKAYYFGYIIHRLLLCALGRRPEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTR
DVRSYVQKCVDNGKEVNLQFAIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLT
YASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMIFVLVNFRQLPAGINAIVAISCYSGY
NQEDSVIMNQSSIDRGFFRSLFFRSYRDEEKKMGTLVKEHFGRPDRAVTMGMRHGSYEKL
DDDGLAPPGTRVSGEDVIIGKTTPISQDEAQGQSSRYSRRDHSISLRHSETGMVDQVLLT
TNADGLRFVKVRVRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGVTPDIIVNPH
AIPSRMTIGQLIECIMGKVAAHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFERMYNG
HTGRPLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMER
DCMIAHGAANFLKERLFDQSDAYRVHVCESCGLIAIANLKKNSFECRGCKNKTDIVQVHI
PYACKLLFQELMSMAIAPRMLTKDLKSAKGRKSGASSLVFS
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggagtataataacgagtacgaaaaggatccgaattacatggaagaggaagatgaggag
gaggagatcacccaggaagacgcttgggcggttatctctgcgtatttcgaagagaaaggt
ctcgtccgtcagcagctcgattcgttcgatgagtttattcagaatagtatgcaagaaatc
gtcgatgagtccgctgatatcgagatccgacctgaatcccagcacaatcctggccaccaa
tctgatttcaccgagacaatctacaagattagttttggacagatttatctgagtaaaccc
atgatgaccgaatctgatggtgagactgccaccttgttccctaaggctgcaaggttgaga
aacctcacctactcggctcctttgtatgttgacgtaagtaagagagttataaagaaaggg
catgatggtgaggaagtcacggagacacaggattttaccaaagttttcattggaaaggtt
cccatcatgctccggtctagttactgtaccttgtttcagaactcggagaaagatttgaca
gagctgggagaatgcccttatgatcagggcggatactttattattaatgggagtgaaaag
gttctcattgctcaggagaagatgagtacgaaccaagtttatgttttcaagaagcgacag
ccaaataagtatgcatatgttggcgaagtccgttccatggctgagaaccaaaatagacct
ccaagcaccatgtttgtgcgcatgcttgctcgtgctaatgccaaagggggttcatctggg
cagtatattcggtgtactctaccatacatcaaaaaagaaattcctattatcattgtcttt
cgtgccttgggatttgttgccgataaggacatcttggaacatatttgctatgactttgcc
gacactcagatgatggagttgctcaggccttccttggaagaggctttcgttattcaaaat
cagctggttgcacttgactatatcgggacacgcggtgcaccccctggtgcacccaaggaa
aagaggataaagtatgcaagagatatccttcagaaagaactgcttcctcatgtaggagtt
ggggagttttgtgagacgaagaaagcttactattttgggtatatcatacaccggctgcta
ctttgtgcacttggccgaaggccagaagatgatagggatcattatggtaacaaaaggctg
gatcttgctggtcctttactcggagggctgtttagaatgcttttcagaaagctaacgagg
gatgtgagatcttatgttcagaagtgcgttgacaatggcaaagaagtcaatcttcaattt
gccatcaaggctaaaacaattacctctggcctgaaatattctcttgctactgggaattgg
ggccaggcaaatgctgctggcacaagagctggagtctctcaggttttaaatcggttaaca
tatgcttccactttgtcacatttgaggcgtctcaattctcctattgggcgtgaaggaaaa
ttggcgaaaccaagacaactgcacaactcacagtggggtatgatttttgtcttagtcaac
tttaggcaacttccagcaggaattaatgctattgttgccatttcttgctattctggatat
aatcaggaagattctgtcatcatgaaccagtcttcaatagaccgtggtttctttagatcc
ttgttcttccggtcttacagagatgaggagaaaaaaatggggacgcttgtcaaagaacac
tttggacgaccagatagagcagttacaatgggtatgcggcacggttcttatgagaagctg
gacgatgatggtcttgcacctcctggtactagagtgtcaggtgaagatgtaatcattggg
aaaaccactccaatatctcaagatgaggctcaaggacaatcatcacgatacagtagacgc
gatcacagtataagcttgcgacatagtgaaactggaatggtggatcaggttttattgacc
acaaatgcggatggtttgaggttcgtgaaagtgagggttagatcggttcgtatacctcag
attggagacaaatttagtagtagacatggtcagaagggaactgttggcatgacctacacg
caggaggacatgccttggacgattgaaggcgttactcctgatattattgtgaatccgcat
gctattccgtctcggatgacaattggacagctaattgagtgcatcatgggaaaagtggca
gctcacatgggaaaagaaggagatgcgactccttttacagatgtcacggtggataacata
agcaaagctctacataaatgtgggtaccaaatgcgtggatttgagagaatgtacaatgga
cacacgggcagaccactcacagctatgatattccttgggccaacgtactaccaaaggttg
aagcatatggttgatgacaagattcactctcgtggacgaggtcctgtacaaatcttaaca
aggcaaccagctgaagggcgatcccgtgatggtggtctgcgttttggagaaatggaacgt
gattgcatgattgcacatggtgctgccaactttttgaaagagaggctgtttgatcagagc
gatgcgtatagggtacatgtgtgtgaatcctgtggtctcatcgccattgcaaatctgaag
aagaattcttttgaatgcagaggttgcaagaacaaaacagatattgttcaggttcacatt
ccatacgcttgcaaactgctctttcaagagcttatgtcaatggcgattgcgccaaggatg
cttaccaaagaccttaaatcagctaaaggcagaaagtcaggagcaagctctctagttttt
tcgtaa
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