KEGG   Brassica oleracea (wild cabbage): 106338745
Entry
106338745         CDS       T04124                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe00040  Pentose and glucuronate interconversions
boe01100  Metabolic pathways
Module
boe_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:boe00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106338745
Enzymes [BR:boe01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     106338745
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Beta_helix
Other DBs
NCBI-GeneID: 106338745
NCBI-ProteinID: XP_013633102
UniProt: A0A0D3BZC8
LinkDB
Position
C4:complement(35230747..35233347)
AA seq 399 aa
MEKFQCTIMFAYLLMSTTIFSSLPIQSHATKHFNVLSFGAKPNGIVDSATAFAKAWDAAC
SSTEAAVIYVSKGRYLVSPVRFSGESCKSLDIVFRIDGTLVGSGDYNFLGREETWFSFER
VTGVSVIGGSFDAKGPSLWACKASSNNSCPAGATTISFVESSRVKVKGLLSLNSQMFHIV
INRCRNVKINDIRIVADGKSPNTDGIHVQLSTDVEIRNASIKTGDDCISIGPGTKNLWVE
RVTCGPGHGISIGSLGKDREEEGVQNVTVKKTVFVGTDNGLRIKSWANPSSGFVQRVRFL
ESLMFNVKFPLIIDQHYCPHNINCPSQESGVRINDVIYQGIRGTSATKIAVKLDCSAKAP
CTRIRMKDISLRYANEAAQSSCVNVLGDALGLVKHQTCF
NT seq 1200 nt   +upstreamnt  +downstreamnt
atggagaagttccaatgtacgattatgttcgcttatttacttatgtcaacaacaatcttc
tcgtctttgccaatacaatctcacgcgacaaaacacttcaatgtgctgagcttcggagct
aaacctaacggtattgttgactcagctacagcttttgccaaggcatgggatgcagcgtgt
agttcgacggaggctgcggttatatacgtatccaaaggacgatatcttgttagccctgtt
cgtttcagcggtgaaagttgcaagagccttgatattgttttcaggatcgatgggactctt
gttggttcgggggactataactttcttgggcgagaagaaacatggttcagctttgaaaga
gtcactggagtttctgttatcggtggttctttcgacgctaagggaccttcattgtgggct
tgcaaggcctcctccaacaacagctgtcccgctggtgctacgacaataagttttgtggag
tcaagtagagtcaaggtgaagggattattgtcattgaacagccaaatgttccacatcgtc
attaatcgatgccgtaatgttaagatcaacgatattcggatcgtggcggatggaaaaagc
ccgaacacagatggcattcatgtccaactatcaactgatgttgaaattcgtaacgcttcc
atcaaaactggtgacgactgtatctccattggccccggaaccaagaacttgtgggtcgaa
cgagtcacatgtggccctggtcatggaatcagcattgggagcttgggaaaagatagagaa
gaggaaggggtacaaaatgtgacggtgaagaaaacagtttttgtaggaacagacaatgga
ttaagaattaagtcatgggctaacccatcatccggttttgttcagagggttcgattctta
gagtctcttatgttcaatgtcaagtttcctctcatcattgaccaacactattgccctcat
aacataaactgtccttctcaggaatcaggagtgaggataaacgatgtgatatatcaaggc
ataagaggaacatcagctacaaaaattgcggtaaaattggattgcagtgctaaagctcca
tgcacacgtattagaatgaaggacattagtctgagatatgctaacgaagctgcacaatct
tcatgtgtcaatgtccttggagatgcacttggtttggtcaaacatcaaacctgcttctga

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