Brassica oleracea (wild cabbage): 106338954
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Entry
106338954 CDS
T04124
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 9
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106338954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106338954
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106338954
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
106338954
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
zf-TRAF
DUF1644
DUF4729
Motif
Other DBs
NCBI-GeneID:
106338954
NCBI-ProteinID:
XP_013633262
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Position
C4:42857108..42857916
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AA seq
212 aa
AA seq
DB search
MKNKKCATCSLPTLSRNRAMERVLELLRVPCPNAGCSKIVSCSETLAHVNHCPFTQRTCP
FSSCDFTCSFKDLYKHSAAKHSIAAPRAAKFGLSFSLSMFKCGTLVCTHLSTYKRIILKE
QTTEGEGEIVVVEWFDMPDGRIFYAYCIGPGADKFSYQLKLSLASGDHLSFNSNLQRVRE
VSNEPPCSRYMLVPSCMLPYRKCGICIKRETH
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacaagaagtgtgcaacatgctccttacccactctttcccgcaacagagctatg
gagcgggttcttgaactacttagagttccatgtccgaatgctggttgctccaagattgtc
tcttgttctgaaactttggcccatgtaaatcattgtcctttcacccaacgtacttgcccc
tttagcagctgtgactttacttgctccttcaaggatttatataaacacagcgctgctaaa
cacagcattgcggcaccacgcgctgctaaatttggcctttccttttccttgagcatgttt
aaatgtggaacgctcgtgtgtacgcatctctcaacgtataagaggatcattctcaaggaa
cagactacagaaggagaaggagaaattgtggttgtggagtggttcgacatgccagacggt
cggatattctatgcctactgtattggaccaggagcagacaagttctcctaccaactgaag
ctatctttagcttccggtgatcacttgtcgtttaactcaaacctccaaagagtccgtgaa
gtgagcaatgaaccaccatgttcacgctatatgttggttccttcatgtatgttgccttac
cgcaagtgtggtatatgcattaagcgggagactcattag
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