Brassica oleracea (wild cabbage): 106339038
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Entry
106339038 CDS
T04124
Name
(RefSeq) protein argonaute 4-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106339038
03036 Chromosome and associated proteins [BR:
boe03036
]
106339038
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106339038
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106339038
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
106339038
microRNA pathway
RISC loading complex
106339038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoL2
ArgoMid
Peptidase_C1
Motif
Other DBs
NCBI-GeneID:
106339038
NCBI-ProteinID:
XP_013633323
UniProt:
A0A0D3C350
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Position
C4:complement(45945360..45948992)
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AA seq
695 aa
AA seq
DB search
MSDVFSHRDSRLMDEVLNQKPHDICWAIALTRQATSILRSLGVIQDDQRLSIQYLINSAR
SSGPAPPGWKGGIGSLEQAAVFFKQGGAVLNTVCPFTTNVHSTVSSTNPSFTGQRRFVFE
TTIHRRSDFPSLKVFEQKLLSCLIQNPIATAVHDFPSLARIGKDVYVPNKHEESRRDMGH
IDEQHVMLLCGSTPKHWLFQDSMGKRRGEAGYVKFMKTKETITEFAEMRFLYEEEQPDGQ
GKRKRQHSGRGGRGGKRGGGRGGGRVGGRGGGRGGGRGGGRVGGRGGGRVGGRGGGRGGG
RVGGRGGGRVGVRVGVRVGGRVGGRRAKHCTLIPLQRYTKALNTFQRSALVEKSRQKPQE
RMNVLSKALKVSNYETEPLLRSCGISISSNFTQVEGRVLPAPKLKMGRGDVLFPRNGRWN
FNNKQFVEPTEIDKWAVANFSASCNVRQLVDDLIRIGGSKGIEISAPFDVFEEGHQFPFY
PPLIRVEKMFEEIQSKLPGAPQFLLCLIPERKNCNIYYSMLSVERTPAFTTVISKVQTII
LGMDVSHGSPGQSDVPSIAAVVSSRQGPLVSKNKASVRTQPSKAEMIESLVKKNGTEDDG
IIKFHFLDEIHFSPDELQELVHSLSYVYQRSITAISVVAPICYAHLAAAQLGTFMKFEDQ
SETSSSHGGVTAPGPVSVAQLPKLKDNVANSMFFC
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgtattcagtcaccgggattcaagactcatggatgaggtcttgaatcaaaaa
ccacacgatatttgctgggccatcgccctcacaagacaagcgacgtcaatcctacgatca
ttaggcgtcattcaagatgaccagaggctctcaatacaatacctcatcaactcagctcga
tcttcagggccagctccacccggttggaagggaggtattggaagcttggaacaagcagca
gtctttttcaagcagggaggagcagttttgaacactgtctgcccgttcactactaacgtc
cattctacagtcagttctacaaacccgtcatttactggacagaggagatttgtttttgag
accacaattcaccgtagaagtgatttcccaagtttaaaagtgtttgaacaaaaattgctt
agttgtcttatacaaaacccaattgcaacagcagtacacgactttccctctctcgctcgt
attgggaaggatgtttatgtaccaaacaaacacgaagaaagtcgcagggatatgggccat
atcgatgaacagcacgtgatgcttctttgtgggtcaacacctaagcactggttatttcag
gattccatgggtaaacgtagaggagaagctggttacgtaaaattcatgaaaaccaaggaa
actatcaccgaatttgccgagatgaggttcttgtacgaggaagaacaaccggatgggcag
ggaaagagaaagaggcagcattccggacgtggtgggcgcggtggtaagcgcggtggtggg
cgcggtggtgggcgcgttggtgggcgcggtggtgggcgcggtggtgggcgcggtggtggg
cgcgttggtgggcgcggtggtgggcgcgttggtgggcgcggtggtgggcgcggtggtggg
cgcgttggtgggcgcggtggtgggcgcgttggtgtgcgcgttggtgtgcgcgttggtggg
cgcgttggtgggcggcgcgcaaagcactgcaccttgattccccttcagaggtacacaaag
gcgctgaacactttccagagatctgccctggttgagaaatctagacagaagccccaagag
aggatgaacgttctgtcgaaagctctgaaagtgagcaactacgaaactgaacctctcctg
cgttcatgtggcatttctatcagctccaacttcactcaggtggagggtcgtgttcttcca
gctcctaagctgaaaatgggacgtggggatgtactgtttccgcgcaatggtcgctggaat
ttcaacaacaagcaatttgttgagccaaccgagattgacaaatgggcagttgcaaatttc
tctgctagctgtaatgtgcgtcaactggttgatgatctaatccgaattggaggatccaaa
ggaattgaaatttctgccccatttgatgtgtttgaggagggtcatcagtttcccttttat
cctcctctgattcgtgtagagaagatgtttgaagagatccagtctaagctccctggtgct
cctcagttccttctctgtctcatccccgaaaggaagaactgcaacatttactattcgatg
ttgagtgtggagcgtactccagcctttacaacagtgatttcaaaggttcaaaccatcatc
cttgggatggatgtttcacatggatctcctggacagtctgatgtcccctccattgctgcg
gtggtgagttcaaggcaggggcctctagtctcgaaaaacaaagcatctgttcggacacag
ccttcaaaagctgagatgattgagtcacttgtcaagaaaaatggaactgaagatgatggc
attatcaagttccattttcttgatgagattcatttctctcctgatgagcttcaagagctc
gtccactcgctctcttacgtgtaccaaagaagcataaccgccatctctgttgttgcaccg
atctgctatgctcacttggcagctgctcagctaggaacgttcatgaagtttgaagatcag
tctgagacgtcctcgagccatggtggcgtgacagctccaggaccggtctctgttgcgcag
ctccctaaactcaaagacaacgtcgccaactccatgttcttctgttag
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