Brassica oleracea (wild cabbage): 106339084
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Entry
106339084 CDS
T04124
Name
(RefSeq) chaperonin CPN60-like 1, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106339084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106339084
03110 Chaperones and folding catalysts [BR:
boe03110
]
106339084
03029 Mitochondrial biogenesis [BR:
boe03029
]
106339084
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106339084
Enzymes [BR:
boe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106339084
Messenger RNA biogenesis [BR:
boe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106339084
Chaperones and folding catalysts [BR:
boe03110
]
Heat shock proteins
HSP60 / Chaperonin
106339084
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106339084
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106339084
Exosomal proteins of other body fluids (saliva and urine)
106339084
Exosomal proteins of breast cancer cells
106339084
Exosomal proteins of colorectal cancer cells
106339084
Exosomal proteins of bladder cancer cells
106339084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7902
Motif
Other DBs
NCBI-GeneID:
106339084
NCBI-ProteinID:
XP_013633358
LinkDB
All DBs
Position
C4:complement(47729949..47733686)
Genome browser
AA seq
582 aa
AA seq
DB search
MYRLVSNIASQARNARKCTTQFGSMLSSTRSYSQKDIRSGVKELADTGQVTMGPKGCNVT
IEQKDDGSITITQSWRAPKVTKDDVTVAKSNESKGRVKNVGASPVKQVAKATNNVAGDGT
TYATVLTRAIFTEACKSVTAGKSAYHAAYRAMHLRLGIKLAVDTVLKNLKSRARMISTFE
EIAQVGTASANGDREIGELIAKAMESVGKEGVITVQGGNTLFNELEVVEGMKIDRGYRSP
LFITNEKYQTCELEDPLILIHEKEITSPDSTSTVLESALRKQRSLLIIAEDLDSFSVAGL
VWKTPRSHHICAVKAPGFGENRRAYMHDLATLTGAQVITEERGMSLEKIELGMLGTCKKV
IVSKENTVFIGGAGDKKYIGERCEQIRSMVETSESGYDKDMLQDRLAKLSESVAVIKIGG
TSEREISEKIDRVNNALNATKAALEEGIVPGGGFALLYASKELEKKLSTNYIFQKIGVQI
IQNALKIPVYSIASNAGVDGKVIVDKLLESNNPDIGYDVAKGEYVDMVKSGIIDPVKMIR
TALVDAASVSLLLTTTEAVVTEIPTKEDAFPVMGGGYGCMGF
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgacttgtctccaacattgcttcacaagctagaaacgccagaaagtgtacaacc
cagtttggaagcatgctcagttccactagaagttattcacaaaaagacataaggtccggt
gttaaggagcttgctgatacaggtcaagtcactatgggacccaaggggtgtaatgtcacc
atcgaacaaaaagatgatggtagtatcaccatcacacaaagctggcgtgcaccaaaggtg
acaaaggatgatgttactgttgccaagagcaatgagtccaagggaagagtcaagaacgtt
ggtgccagtcctgtcaaacaggttgctaaagccacaaataatgtagctggtgatggaacg
acgtatgctacagtccttactagagctatcttcacggaagcttgtaaatcagttactgct
ggaaagagtgcatatcatgctgcatatcgtgcaatgcacctaagacttggtatcaagtta
gcagttgatactgttttgaagaacttgaagagtagagcacgcatgattagcactttcgaa
gaaattgcccaagttggaacagcatcagctaatggagatagagagattggtgaacttatt
gcaaaggctatggaaagtgtcggcaaagagggagtgatcacagttcaaggtggcaacact
ttgtttaacgagttggaagttgttgagggtatgaagattgacaggggatacagatcccca
ctcttcattacaaacgagaaataccaaacatgtgagctagaagatcctctcattctcatc
cacgagaaggaaattactagtcctgattctacgtctacagttttagagtcggctctcagg
aaacaaaggtcgctgctgatcattgcagaggatttggatagcttttctgttgctgggcta
gtttggaaaacgcctcgttctcaccatatctgtgctgtgaaggcccctggttttggagaa
aaccgtagggcttatatgcacgatctagctaccctcacaggagcccaggtaataacagaa
gagagaggtatgagtcttgagaaaatcgaactcggtatgcttggaacctgcaaaaaggta
attgtatccaaagaaaacactgtttttattggtggggctggtgacaagaaatatattgga
gaacgatgtgaacagatacgatccatggttgaaacgagtgagtctggctatgacaaggat
atgttacaagataggttggctaagctttctgagagtgttgctgtaataaagatcggagga
acgagtgagagagaaattagcgaaaagatagatagagtaaacaatgctctaaatgcaacc
aaagcagctttagaagaaggtattgttccaggcggtggttttgctcttctgtatgcgtca
aaagaacttgagaagaagctttccacaaattatatttttcaaaaaatcggtgtccaaatc
atccaaaacgctctcaagatacctgtttacagtattgcttccaacgctggagtcgacggt
aaagtcatcgttgacaagcttttggaatcaaataatcctgacatcggttatgatgttgct
aaaggagaatacgtggatatggtgaagtctggtattatcgaccctgtgaaaatgatcaga
accgcattggttgatgctgctagtgtctcgcttttgttgactacgacggaagcagttgtg
accgagattccaacaaaagaagatgcgtttcccgttatgggtggtggttatgggtgtatg
gggttctga
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