Brassica oleracea (wild cabbage): 106339923
Help
Entry
106339923 CDS
T04124
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit, cytoplasmic-like
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106339923
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
boe01007
]
106339923
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106339923
Enzymes [BR:
boe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
106339923
Amino acid related enzymes [BR:
boe01007
]
Aminoacyl-tRNA synthetase
Class II (U)
106339923
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106339923
Prokaryotic type
106339923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD3
tRNA_synthFbeta
PheRS_DBD1
tRNA-synt_2
tRNA-synt_2b
MC4
Raf1_N
Motif
Other DBs
NCBI-GeneID:
106339923
NCBI-ProteinID:
XP_013634246
LinkDB
All DBs
Position
C4:complement(40038272..40041597)
Genome browser
AA seq
490 aa
AA seq
DB search
MAEEAILGFLQNNDEIAHSGYFAAEHNLDHEEVKNVIKSLQAFRYIEAKVLKREFFDLTD
EGKKYAAEGSPEFHFFSAVPEEGTISMDDLQRMLDPFVFDVGSKQAPKKKWVAMGQQVSR
TVQHVEDKVKEMLLQIQQGLELDQETLKSLKYRKLIILTEKWSGYSEVKKGPNYAPKRRS
LATDLTRENLQNWQELDFKEYNVNAKGQPVDSGHLHPLLKVRKQFKDIFCQMGFEEMPTN
NFVESSFWNFDALFQPQQHPARDSHDTFFLKAPWTTRELPEDYVARVKQVHESGGYGSRG
YNCEWKREEANKNLLRTHTTAVSSRMLYALAKGPFTPKKYFSIDRVFRNEAVDKTHLAEF
HQIEGVVCDRGLTLGDLIGVLQEFFSRLGMSNLRFKPAYNPYTEPSMEIFSYHAGLEKWV
EIGNSGMFRPEMLQPMGLPEDVRVIAWGLSLERPTMILYKCDNIRELFGHKVDLKKVKEN
PICRIGIESA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaggcgattctagggttcctgcagaacaacgatgaaatcgcacattcaggt
tacttcgcggccgagcacaacctcgatcacgaagaagttaaaaacgtcatcaagagctta
caggcttttcgctacatcgaagctaaggtgcttaaacgggaatttttcgatttgactgat
gaagggaagaaatatgcggctgaagggtcgccggagtttcactttttctcggctgttccc
gaggaaggtaccatatcaatggatgatctacagagaatgctagatccttttgtattcgat
gttggaagtaaacaagctccaaagaaaaagtgggttgcaatgggacagcaagtctctaga
acggttcaacatgttgaagataaagtgaaggagatgcttttacaaatacagcaaggactg
gaacttgaccaagaaactctcaaatctctcaaatacaggaaactcatcatattgacagag
aaatggagtggctattctgaagtaaagaaaggtcccaactatgctcccaaaaggaggagt
ttggccactgatttgactcgagaaaatctacaaaattggcaagagttagatttcaaggag
tataacgtcaatgctaagggacagcctgttgattctgggcatctccacccccttctaaag
gtgcggaagcagttcaaagacatattttgtcagatggggtttgaagagatgccaacaaac
aactttgttgagagcagcttctggaattttgatgcactgttccaaccgcagcagcaccct
gctcgtgactctcatgacaccttctttctgaaagctccttggacgacaagggaattacca
gaagattatgttgcaagggtgaaacaagttcatgagtctggtggatatggatcgcgaggg
tataattgtgagtggaaaagagaggaagcaaacaaaaatcttctccgtacccacacaacg
gcagtgtcgtctaggatgctttatgcactcgcaaagggaccattcactccgaagaagtac
ttttcaatagaccgtgtcttcagaaacgaggctgttgacaaaacccatctggcagagttc
catcagattgaaggtgtggtctgtgatcgtggtcttacattgggtgatctcattggtgta
ttacaagaattcttctctcgattagggatgtccaatctacgtttcaagcctgcatacaac
ccatacactgaaccaagcatggagattttcagctaccatgcaggactagagaaatgggta
gagattggaaactctggcatgttcagacctgaaatgctacaaccaatgggtcttccagag
gatgttcgagtcattgcatggggtctctctcttgaaagaccaacaatgatcttatacaaa
tgtgacaacatccgcgagctgtttggacacaaggtggatcttaaaaaagttaaagagaat
cccatctgtcgcattggaatcgaatcagcatga
DBGET
integrated database retrieval system
