Brassica oleracea (wild cabbage): 106340005
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Entry
106340005 CDS
T04124
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 14
KO
K05391
cyclic nucleotide gated channel, plant
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106340005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
boe04040
]
106340005
Ion channels [BR:
boe04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106340005
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF2786
Motif
Other DBs
NCBI-GeneID:
106340005
NCBI-ProteinID:
XP_013634323
UniProt:
A0A0D3C1U1
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Position
C4:42535191..42539421
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AA seq
728 aa
AA seq
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MEFKRDNTVRFYGDEKQTLEVTEKRLPLPMFKSSAALFQKQELGTSKKSIFKIPRFGRFK
VFPENFEIERDKILDPGGDVVLQWNRVFLFWCLVALYVDPLFFFLYSVKRTGRSSCMTTD
LNLGIVVTFFRTLADLFYVLHIVIKFRTAYVSRTSRVFGRGELVKDPKLIARRYLRSDFI
VDLIACLPLPQIVSWFILPSIRSSHSDHTTNALVLIVLVQYIPRLYLIFPLSAEIIKATG
VVTTTAWAGAAYNLLQYMLASHILGAAWYLLSIQRQATCWKAECHKEFAPLECVTDFFDC
GTLHRPDRNNWQNITVVFSNCDPSNDIKFTFGIFADALTKNVVSSPFLEKYLYCLWFGLQ
NLSSYGQNLDTSTSVLETMFAILVAIFGLVLFALLIGNMQTYLQSITVRLEEWRLKRRDT
EEWMGHRQLPQDLRERVRRFVQYKWLATRGVDEETILHSLPADLRRDIQRHLCLDLVRRV
PLFAQMDDQLLDAICERLVSSLSTQGNYIVREGDPVTEMLFIIRGKLDSSTTNGGRTGFF
NSITLKPGEFCGEELLAWALLPKSKVNLPSSTRTVRALEEVEAFALQAEDLKFVANQFRR
LHSKKLQHTFRYYSHQWRTWAACFVQVAWRRYKRRMVAKSLSLAESFSSYEEEEAVAVAA
EEIMSQQGERQSSNPSRHSTSIGKPHFAATILASRFAKNTRKTAHKLKDVEVPMLPKPDE
PDFSVDGD
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggagttcaaaagagacaatactgtcagattctatggagacgagaagcaaaccctagaa
gtaacagagaagcgtctaccattaccaatgttcaaatcatcagcagctctatttcaaaaa
caagagctaggaacctcgaagaagagtatcttcaagatccctaggttcggtagattcaaa
gtcttcccggagaatttcgagatcgagagagacaagattctagatcctggtggtgacgtg
gtgcttcaatggaacagagttttcctcttttggtgtctcgtcgctctttacgtagaccct
ttgttcttcttcctgtattcagtcaaacgcactggacgatcctcttgtatgaccacggat
ttgaatcttggaatcgtcgttactttctttagaacgctagcggatctcttctacgtattg
cacattgtcatcaagttcagaacggcttacgtgtctcgcacttcgagagtgtttggtcgt
ggagaacttgtgaaagatcctaagttgattgctagaagatacttgagatcagacttcatc
gttgacctcatcgcttgtttgcctcttcctcagattgttagttggtttattttgccatca
atcagaagctctcactcagatcatacaacaaatgcacttgtcctcattgttcttgttcaa
tacattcctaggctttatctcattttccctctaagcgctgagattatcaaagctaccgga
gtagtcacaaccacagcttgggccggtgctgcttacaatcttcttcagtatatgcttgct
agtcatattctaggagcggcgtggtatctactgtcgatacaacggcaagctacatgttgg
aaagcagaatgtcataaagaatttgcgcctctagaatgtgttacagatttttttgactgt
ggtacattgcaccgaccagaccggaataactggcagaacataacggttgtcttcagcaac
tgtgatccttcaaatgatatcaaattcactttcgggatcttcgcggatgctctcaccaag
aacgtggtttcttcgccgttcttggagaagtatttgtattgcttatggtttggattacag
aatctaagttcttacggacagaatcttgatacaagcacctctgttcttgagaccatgttt
gctatcctcgtggctatctttggtcttgttttgtttgctcttttaatcggaaacatgcag
acgtatttgcaatcgatcactgtgaggcttgaggagtggagactgaagagaagagacaca
gaagaatggatgggacatcgtcaactacctcaggatcttagagaacgagtgagacgtttt
gttcagtataaatggttagctactcgaggagttgatgaagaaaccattcttcattcatta
ccagcagatcttcgaagagacatccaacgacatctctgtcttgaccttgttcgtcgtgta
ccgctgtttgcgcaaatggatgatcagttactagacgcgatatgtgaacggttagtgtca
tctctaagcacacaagggaactacattgtacgtgaaggtgatccagtgacggaaatgctc
ttcatcatccgtggaaagctcgatagctcgacgactaacggaggcagaaccggtttcttc
aactcaatcacactcaaaccaggagagttctgtggagaagagcttcttgcatgggcactg
cttccaaaatcaaaagtaaacttaccatcatctacaagaacggtgcgagctttagaagaa
gttgaagcctttgctttacaagcagaggatctcaagtttgttgctaaccagttcaggcgt
ttacatagcaagaagctgcaacacacgttccgttactactctcaccagtggagaacgtgg
gctgcttgtttcgtacaagtggcttggagacggtataagagaagaatggtggctaagagt
cttagcttggctgagtcattctcatcttatgaagaagaagaagctgttgcggttgcagct
gaggagataatgagccaacaaggagagagacagagcagtaatccatcgcgtcattctact
tctattgggaaaccacattttgctgcaacgatacttgcttcgaggtttgctaagaacacg
aggaagacggctcataagttgaaagacgttgaggtacctatgcttcctaaaccggatgaa
cctgatttctctgtggatggagattaa
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