KEGG   Brassica oleracea (wild cabbage): 106340035
Entry
106340035         CDS       T04124                                 
Name
(RefSeq) ras-related protein RABF1-like
  KO
K07887  Ras-related protein Rab-5A
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe04144  Endocytosis
boe04145  Phagosome
boe04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:boe00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    106340035
   04145 Phagosome
    106340035
   04148 Efferocytosis
    106340035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:boe04131]
    106340035
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:boe04147]
    106340035
   04031 GTP-binding proteins [BR:boe04031]
    106340035
Membrane trafficking [BR:boe04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    106340035
 Endosome - Lysosome transport
    106340035
Exosome [BR:boe04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   106340035
  Exosomal proteins of other body fluids (saliva and urine)
   106340035
  Exosomal proteins of colorectal cancer cells
   106340035
  Exosomal proteins of bladder cancer cells
   106340035
GTP-binding proteins [BR:boe04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    106340035
SSDB
Motif
Pfam: Ras Roc Arf RsgA_GTPase Gtr1_RagA GTP_EFTU MMR_HSR1 AAA_7 G-alpha FeoB_N TniB
Other DBs
NCBI-GeneID: 106340035
NCBI-ProteinID: XP_013634356
LinkDB
Position
C4:complement(30370329..30372210)
AA seq 199 aa
MGCAASLPDRNSGALNGLSSSENADAKNLRVKLVLLGDSGVGKSCIVLRFVRGEFDTTSK
VTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAAVAVIVYDITSPESFK
KAQYWVKELQKHGAPDIVMALVGNKADLHEKREVLTDDGMELAEKNGMFFIETSAKTADN
INQLFEEIGKRLPRPSPSS
NT seq 600 nt   +upstreamnt  +downstreamnt
atgggatgtgctgcttctcttccagacaggaactctggagccttaaacggtcttagcagc
tcagagaatgcagatgctaagaatctacgcgtaaagttagttctgttaggagactctggc
gtgggtaaaagctgtattgtccttcggtttgtccgtggtgagtttgatacaacatctaag
gtgactgttggagcgtcgttcttgtcccagacaatagccttgcaagactctaccacggtg
aagtttgaaatatgggatacagcagggcaagagaggtattctgctcttgcgccactatac
taccgtggagctgcagttgctgtcattgtgtatgatataacaagccctgaatcttttaag
aaagctcagtattgggttaaggaactgcaaaagcatggagctccggatattgttatggct
ttggttggtaacaaagctgatctacatgaaaaaagagaagtactaaccgatgatggtatg
gagcttgcagagaagaatggcatgttctttattgagacgtctgccaagacagcagataac
ataaaccaactgtttgaggaaattggcaagaggctacctcgtccttctccttcatcatga

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