Brassica oleracea (wild cabbage): 106340035
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Entry
106340035 CDS
T04124
Name
(RefSeq) ras-related protein RABF1-like
KO
K07887
Ras-related protein Rab-5A
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04144
Endocytosis
boe04145
Phagosome
boe04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
106340035
04145 Phagosome
106340035
04148 Efferocytosis
106340035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106340035
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106340035
04031 GTP-binding proteins [BR:
boe04031
]
106340035
Membrane trafficking [BR:
boe04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
106340035
Endosome - Lysosome transport
106340035
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106340035
Exosomal proteins of other body fluids (saliva and urine)
106340035
Exosomal proteins of colorectal cancer cells
106340035
Exosomal proteins of bladder cancer cells
106340035
GTP-binding proteins [BR:
boe04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
106340035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
RsgA_GTPase
Gtr1_RagA
GTP_EFTU
MMR_HSR1
AAA_7
G-alpha
FeoB_N
TniB
Motif
Other DBs
NCBI-GeneID:
106340035
NCBI-ProteinID:
XP_013634356
LinkDB
All DBs
Position
C4:complement(30370329..30372210)
Genome browser
AA seq
199 aa
AA seq
DB search
MGCAASLPDRNSGALNGLSSSENADAKNLRVKLVLLGDSGVGKSCIVLRFVRGEFDTTSK
VTVGASFLSQTIALQDSTTVKFEIWDTAGQERYSALAPLYYRGAAVAVIVYDITSPESFK
KAQYWVKELQKHGAPDIVMALVGNKADLHEKREVLTDDGMELAEKNGMFFIETSAKTADN
INQLFEEIGKRLPRPSPSS
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgggatgtgctgcttctcttccagacaggaactctggagccttaaacggtcttagcagc
tcagagaatgcagatgctaagaatctacgcgtaaagttagttctgttaggagactctggc
gtgggtaaaagctgtattgtccttcggtttgtccgtggtgagtttgatacaacatctaag
gtgactgttggagcgtcgttcttgtcccagacaatagccttgcaagactctaccacggtg
aagtttgaaatatgggatacagcagggcaagagaggtattctgctcttgcgccactatac
taccgtggagctgcagttgctgtcattgtgtatgatataacaagccctgaatcttttaag
aaagctcagtattgggttaaggaactgcaaaagcatggagctccggatattgttatggct
ttggttggtaacaaagctgatctacatgaaaaaagagaagtactaaccgatgatggtatg
gagcttgcagagaagaatggcatgttctttattgagacgtctgccaagacagcagataac
ataaaccaactgtttgaggaaattggcaagaggctacctcgtccttctccttcatcatga
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integrated database retrieval system