Brassica oleracea (wild cabbage): 106340293
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Entry
106340293 CDS
T04124
Name
(RefSeq) SEC12-like protein 1
KO
K14003
prolactin regulatory element-binding protein
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106340293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106340293
Membrane trafficking [BR:
boe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
106340293
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR5
WD40
EIF3I
Beta-prop_WDR3_1st
WDR55
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_WDR19_1st
Ge1_WD40
Beta-prop_Aladin
Tricorn_2nd
RMC1_N
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
106340293
NCBI-ProteinID:
XP_013634625
UniProt:
A0A0D3BYK2
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Position
C4:32588026..32591194
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AA seq
397 aa
AA seq
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MEIEEASRGESGHVVCGSWIRRPKKVNWAIIAKATKRRGSSSPPLLNIYSFDPITTSLSS
SPLATHTLNESDGDPVAISVHPGGDYFVCSTSKGGCKLFEIAGGATTGITILEKELPPLQ
NAGLQKCMAFSFDGSKLAVGGVDGCLRIMDWPNLSVILEEPKAHKSIRDMDFSLDSEFLA
TTSTDGSARIWKAEDGFPLSTLERSGEENIELCRFSKDGTKPFLFCAAQRGDVPVVNVYD
ISTWKKLGFKKLSRKSASTIAVSLDGKYIALGGKDGDISVAEVKTMEIYHYSKRLHLGQT
IASLEFCHSERVMLTTSSEWGEMVTKLTVPKEWKEWQIYALLFCLFLASVVLAYVFFENS
DSFWKLPMGKDQRRPKISLFGDSSTSTKDHNRWNLDL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggagattgaagaagcgagtcgtggtgaaagtgggcatgtggtgtgcggatcatggatt
cgtcgaccgaagaaagtaaactgggccatcatcgccaaagctaccaaacgccgtggctcc
tcttctcctcctctccttaacatctactctttcgatcccatcactacttctctctcctcc
tctcccttggcaacacatacactcaatgagagtgatggtgatcctgtggcaatctcagtg
caccctggcggagattattttgtttgctcaacttccaaaggtggttgcaagttgtttgag
attgccggaggagcaacaacaggtattactatcttagaaaaagaactccctcctctccaa
aatgctggactacaaaagtgtatggccttcagctttgatggctctaaattagctgttggt
ggagtggatggatgtctgagaattatggattggccaaacctaagtgtaatcttggaggag
ccaaaagcacacaaatccattcgggatatggatttcagtttggactcagagttcttagcc
acaacatcaacagatggatcagctagaatatggaaagcagaagatggtttccctttgtct
actttggaacgtagtggggaagaaaatattgaactgtgccggttctctaaagatggaaca
aaaccttttctgttctgtgctgctcagagaggtgacgttcctgtggtaaatgtttatgac
attagtacatggaagaagcttgggttcaagaagctgtcaaggaagagtgcatctacaata
gcagtcagcttggatggcaaatatattgctttgggtggcaaagatggggatatatcagtc
gctgaagtgaagacaatggagatataccactacagtaagaggctgcatcttggtcaaacc
attgcttcacttgagttctgccatagtgaaagggtaatgctgacaacatcgagtgaatgg
ggtgagatggtgacaaaactcactgtaccaaaggagtggaaagagtggcagatatatgca
ctgttattttgcttgttcctggcgtcagtggtacttgcatacgtgttcttcgagaactcg
gattcgttttggaagttgccaatggggaaagatcaaagaagaccaaagattagtcttttt
ggagattcatccacgtctactaaggatcataataggtggaacttggacctatag
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