Brassica oleracea (wild cabbage): 106340439
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Entry
106340439 CDS
T04124
Name
(RefSeq) polygalacturonase ADPG2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00040
Pentose and glucuronate interconversions
boe01100
Metabolic pathways
Module
boe_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106340439
Enzymes [BR:
boe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
106340439
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
106340439
NCBI-ProteinID:
XP_013634769
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Position
C4:complement(1933719..1935974)
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AA seq
435 aa
AA seq
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MACYCKLLTGFLLWALLMLSWCEASRRSINGYDHHHSYGIFKSNSLIKRRDDGTRLKSFA
RVSSLPPTTVSVSDFGAKGDGKTDDTQAFVNAWNKACSSSGAVNLLVPERKTYFLKSIRL
NGPCKSIITVQIFGTLSASQKRSDYKDITKWITFDSVNSLSVDGGATGTVNGNGETWWQN
SCKRNEAQPCTNAPTALTFYNSKNLRVNNLRVRNAQQIQISIEKCSNVQVSNVEVTAPAD
SPNTDGIHITNSQNIQISKSIIGTGDDCISIETGSQNVNINDLTCGPGHGISIGSLGDDN
SKAFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASDIIFQNIQMDNVKNPIIIDQDYCDK
SKCTEQTSAVQVKNVVYRNISGTSASDIAITLNCSKNYPCQGIVLDKVNIKGGKGSCSNA
NVMDKGIVFPQCKST
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcttgttattgcaaactcttaaccggcttcctattatgggctcttttgatgctttca
tggtgcgaagcttcaagacgcagcattaatggatatgatcatcatcattcttatggaatt
ttcaaatccaatagcttaatcaagcgaagagatgatggtacacgtttgaaaagcttcgca
cgagtctcttcgctgcctccaaccaccgttagtgtttctgattttggagctaaaggagat
ggaaaaaccgatgacacgcaggcgttcgtgaatgcatggaataaagcatgttcttcaagt
ggagccgttaatctcttagttcctgaaaggaagacttacttcctcaagtctattcgatta
aatggtccatgcaaatcaatcattaccgttcagatcttcggaacattatcggcatctcaa
aaacgatcggattacaaagatatcaccaaatggattacgtttgatagcgttaacagtctg
tctgtagatggtggagccaccggaactgtcaacggaaacggcgaaacgtggtggcaaaac
tcatgcaaacggaacgaagctcagccatgcacaaacgcaccaacggctcttactttctac
aactcgaagaatttgagagtgaataatctgagggtgagaaatgcgcaacagattcagatt
tcgattgagaaatgctccaacgtccaggtctcaaatgttgaggtcactgcgcctgctgat
agtcctaacaccgatggtatacacatcactaacagccaaaacattcaaatctccaaatcc
atcattggaacaggtgatgattgtatatctattgaaactggatcacaaaatgttaacatc
aatgatttaacttgtggtcccggtcacggcatcagcattgggagcttaggagatgacaat
tcaaaggcatttgtatcaggtgtgactgtggatggtgctaagctttctggtacagacaat
ggagttaggatcaaaacttaccagggagggtcaggaactgctagcgatatcatattccag
aacattcagatggacaatgtgaagaatccaatcataatcgaccaagattattgcgacaag
agcaaatgcaccgaacagacatctgcggtccaagtgaagaacgtggtgtaccggaacata
agtggcacaagcgcatcagacatagcaataacgttgaactgtagcaagaactatccatgc
caagggattgtgcttgacaaagtgaacattaagggaggcaaaggaagctgcagcaatgct
aatgtgatggataaaggcattgtttttcctcaatgcaaatccacttaa
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