KEGG   Brassica oleracea (wild cabbage): 106340539
Entry
106340539         CDS       T04124                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe00040  Pentose and glucuronate interconversions
boe01100  Metabolic pathways
Module
boe_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:boe00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106340539
Enzymes [BR:boe01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     106340539
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim
Other DBs
NCBI-GeneID: 106340539
NCBI-ProteinID: XP_013634859
UniProt: A0A0D3C657
LinkDB
Position
C4:complement(52475328..52477319)
AA seq 388 aa
MASLLVLFVFFFFISSCSAQSYNVLSFGAKPDGKTDATKEFMAVWKTACASSRPVTIVVP
KGRFLLRSLNFDGSKCKRKHITFRVDGTLVAPADYRVIGNEDYWILFQHLDGVTVYGYGG
VLDAQGTSLWGCKTSGKNCPRGATTIGFQSSRNVVVSGLTSLNSQMFHFVINGCNNVKLQ
GVKVLAAGNSPNTDGIHIQSSSTVSIFSTKISTGDDCVSIGPGTNGLWIENVACGPGHGI
SIGSLGKDAVESGVQNVTVKTVTFTGTQNGARIKSWPRPSSGFARNIRFQHCVMNNVDNP
IIIDQNYCPRNENCPRQVSGIKISDVLFVDIHGTSATEVGVRLNCSPKKPCTGIRLKDVK
LKYRNKPAASACVHAGGIEAGLFQPNCL
NT seq 1167 nt   +upstreamnt  +downstreamnt
atggcttcacttcttgtcctcttcgtcttcttcttcttcatctcctcttgctctgctcaa
tcctacaatgtcttgtcctttggagctaaaccggacggaaagacagacgcaaccaaagag
tttatggcggtttggaaaaccgcttgtgcctcgtctcgtcccgtgaccattgtggttcct
aaaggccggttcttgttaaggagccttaatttcgacggttccaagtgcaagcgcaagcac
atcacgttccgtgtagacggtacattggtggctccggctgattatagagttatcggtaat
gaagattactggattcttttccagcatcttgacggagtcaccgtctacggctacggcgga
gttcttgacgctcaaggaacttctctatggggttgtaaaacatccggcaagaattgtcct
agaggagccacgaccatagggtttcagagctcaagaaacgttgtggtctccgggctgacg
tcactcaacagccagatgttccacttcgtcatcaacggttgcaacaacgtaaagcttcaa
ggagtcaaagtattagccgcaggaaacagccccaacacagacggtatccacattcagtct
tcctccaccgtctctatcttcagtaccaaaatttccaccggcgacgattgtgtctccatc
ggtcccggaaccaacggtctatggatcgaaaatgtagcatgtggtcccggtcacggcatc
agcattgggagcctgggaaaagatgcagtggagtcaggtgtacagaacgtgactgtgaaa
acggtgacgtttacggggacgcaaaacggagcgaggatcaaatcatggcccaggcccagt
agtggattcgctaggaacatccgctttcaacattgtgtaatgaacaacgtagacaacccc
ataattattgaccaaaactactgtcctcgtaacgaaaattgccctcgccaggtttcgggt
atcaaaatcagcgatgtgttgttcgttgatatacatggaacatcggcaactgaagttgga
gtgagacttaattgtagtcctaagaaaccgtgtaccggaattcgacttaaggatgtgaaa
ttaaagtaccgtaataaaccggctgcgtcggcttgtgttcatgccggagggatagaagct
ggattgtttcagccaaactgcctatga

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