Brassica oleracea (wild cabbage): 106340685
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Entry
106340685 CDS
T04124
Name
(RefSeq) polygalacturonase ADPG2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00040
Pentose and glucuronate interconversions
boe01100
Metabolic pathways
Module
boe_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
106340685
Enzymes [BR:
boe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
106340685
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
106340685
NCBI-ProteinID:
XP_013634980
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Position
C4:complement(51628470..51631119)
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AA seq
433 aa
AA seq
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MAHCCTVLTGLLVWSLLMLSWCEASRNNINRYDHSYGTFKSNSLIKRRDDITRLKSVARA
SLRLPTTVSVSDFGAKGDGKTDDTQAFVNAWKKACSSSGAVNLLVPEGKTYFLKSIRLNG
PCTSILTVQILGTLSASQQRSDYKDLSKWITFDGVNSLTVDGGATGTVNGNGETWWENSC
KRNEAKKCTKAPTALTFYNSKNLRVNNLRVKDAQQIQISIEKCSNVQVSNVEVTAPADSP
NTDGIHITNTQNIQVSKSIIGTGDDCISIESGSQNVKINDLTCGPGHGISIGSLGDDNSK
AFVSGVTVDGAKLSGTDNGVRIKTYQGGSGTASNIIFQNIQMENVKNPIIIDQDYCDKSK
CTEQKSAVQIKNVVYRNISGTSASDIAITFNCSKNYPCQGIVLDKVNIKGGKASCSNANV
MDKDGVLPQCKST
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggctcattgttgcacagttcttaccggtttactagtatggtctcttttgatgctctca
tggtgcgaagcttcaagaaacaacattaatagatatgatcattcttatggaacgttcaaa
tccaatagcttaatcaagcgaagagacgatatcactcgtctgaaaagtgttgcaagagcc
tctttgcggcttccaaccaccgttagtgtttctgattttggagctaaaggagatggaaaa
accgacgacacgcaggcgttcgtgaatgcatggaagaaagcttgttcttcaagtggagct
gtaaatctcttagttcctgaaggaaaaacttatttccttaagtctattcgattaaatggc
ccatgcacatcaattcttaccgttcagattttaggaacgttatcggcatctcaacaacga
tcggattataaagatctcagcaaatggattacgtttgacggcgttaacagtctaacggtt
gatggcggggccaccggaactgtcaacggaaacggcgaaacgtggtgggaaaactcatgc
aaacggaacgaagctaagaaatgcacaaaagccccaacggctcttactttctacaactca
aagaatttgagagtgaataatctgagggtgaaagatgcgcaacagattcagatttcgatt
gagaaatgttccaacgttcaggtctcaaatgttgaggtcactgcgcctgctgatagtcct
aacactgatggtatccacatcactaacactcaaaacattcaagtctccaaatccatcatt
ggaacaggtgatgattgtatatctattgaaagtggatcacaaaacgttaaaatcaacgat
ttaacttgcggccctggtcacggtatcagcattgggagcttaggagatgacaattcaaag
gcatttgtatcaggcgtgactgtggatggtgctaaactttccggtacagacaatggagtt
aggatcaaaacttaccagggagggtctggaactgctagcaacattatatttcagaacatt
cagatggaaaatgtgaagaatccaattataatcgaccaagattattgcgacaagagcaaa
tgcactgaacaaaaatcagcggtccaaatcaagaacgtggtctaccggaacataagcggc
acaagcgcatcggacatagcaataactttcaactgcagcaagaactatccatgccaagga
attgtactcgacaaagtgaacattaagggagggaaagcaagttgcagcaatgctaatgtg
atggataaagacggtgttttgcctcagtgcaaatccacctga
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