KEGG   Brassica oleracea (wild cabbage): 106340932
Entry
106340932         CDS       T04124                                 
Name
(RefSeq) polygalacturonase QRT2
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe00040  Pentose and glucuronate interconversions
boe01100  Metabolic pathways
Module
boe_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:boe00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    106340932
Enzymes [BR:boe01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     106340932
SSDB
Motif
Pfam: Glyco_hydro_28 Beta_helix NosD
Other DBs
NCBI-GeneID: 106340932
NCBI-ProteinID: XP_013635211
UniProt: A0A0D3BZY1
LinkDB
Position
C4:complement(37020545..37024000)
AA seq 421 aa
MDFFMLLTYLFSLFHNNQTGPSHSSPDVNSKIFNVFNYGAIGNGYADDTKAFMDAWEDTC
NYIGSKSTMEIPQGRTFLLQPIGFHGPCKSKKIVFSISGNLTAPYAPYQWKCNEDYCHQW
IEFAHINGLYIDGPGTIDGQGPKWWSLNCKKYEQACHRRPRGMVISHSSNVHISNIVVKD
SPNFQMSLEDSKWIFVKQLTITADGDSPNTDGIHIQRCRNVFVHNSNIHTGDDCISIGDG
SKYVNISGISCGPGHGISIGSLGRNGSKETVENVIVRDCIFRKTDNGVRIKTWQGGRGLV
RNILFERIKLHGVTRPIIIDQFYCPHSQCNNHTDAVEIKNIMYKHIHGTAVKKPFVELLC
SKSVPCRDIYMNDIDILDQDEGKGKKYHKRSSHPPAECINVRGESNGAIKPKLACLDSER
H
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggatttttttatgctcttaacatatcttttttctctcttccacaataatcaaacaggt
ccttctcattcttctcctgatgttaacagtaaaattttcaatgtttttaattatggagca
ataggaaatggatatgcagacgatactaaggcattcatggatgcatgggaagacacatgc
aattacattggatctaaatcaaccatggagattcctcaaggaagaacatttcttcttcag
ccaatcgggtttcatggtccttgtaaatccaagaaaatcgttttttcgatcagtggaaac
ctaactgctccttatgctccatatcaatggaaatgcaatgaagattactgtcatcagtgg
atcgaatttgcacatattaatggactttatatcgatggtcctggtacgattgatggccaa
ggacccaaatggtggtcgctaaattgcaaaaagtatgaacaagcatgccacagaagacca
cggggtatggttatatcacattcgagtaatgtgcatataagtaacattgtggttaaagac
agtccaaattttcaaatgtcattggaagattctaaatggattttcgttaagcaactcacc
ataaccgccgatggtgatagccctaatactgatggcattcacattcaacgttgtcggaat
gtcttcgtacacaatagtaacattcatacaggtgatgattgtatatctattggtgatggt
tcaaagtacgttaatatatcaggaatctcgtgtggtccgggtcatgggataagcatcgga
agcttaggtcgaaatggttctaaagaaacagtggaaaacgtcatcgttcgagactgtatc
ttcaggaaaacagataatggagttagaatcaagacatggcagggaggaagaggactagtt
cgaaacattttatttgaacgtataaagctacatggtgtaacccgacctatcatcatcgat
cagttttactgtcctcactcacaatgcaataaccataccgatgctgtggagatcaagaat
ataatgtacaagcacatacatggaacagcagtgaagaaaccgtttgtggaactactatgc
agcaaatcagttccatgcagagatatatacatgaacgatatagacattcttgaccaagac
gaaggaaaaggaaagaaatatcacaaacgatcgtcacatcctcctgctgaatgcatcaat
gttagaggagagtctaatggtgcgataaagcctaagctagcttgtttagattccgaaaga
cattga

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