Brassica oleracea (wild cabbage): 106341374 Help Entry 106341374         CDS       T04124                                  Name (RefSeq) protein CLP1 homolog 5-like   KO K14399   polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78] Organism boe  Brassica oleracea (wild cabbage) Pathway boe03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:boe00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     106341374  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:boe03019]     106341374 Enzymes [BR:boe01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.1  Phosphotransferases with an alcohol group as acceptor     2.7.1.78  polynucleotide 5'-hydroxyl-kinase      106341374 Messenger RNA biogenesis [BR:boe03019]  Eukaryotic type   mRNA processing factors    3' end processing     Pre-mRNA cleavage factor IIm (CFIIm)      106341374 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  CLP1_P CLP1_N Clp1 nSTAND3 AAA_22 ABC_tran AAA_24 FtsK_SpoIIIE AAA_29 MMR_HSR1 AAA_7 Sigma54_activat GTP_EFTU CbiA ATP-synt_ab Motif Other DBs NCBI-GeneID:  106341374 NCBI-ProteinID:  XP_013635606 UniProt:  A0A0D3C0U1 LinkDB All DBs Position C4:complement(39499939..39502417) Genome browser AA seq 434 aa AA seqDB search MSYCGLSMNSDATTASTEFSPQVRRVKLEKQSEIRIHVTQISPLKLRVLHGQVEIFGSEL PRNVWLTFPPLQQFAVFTWYGATLEIDGVTETDNTSVETPMVSYLSVHNSLQVQRHRVTS STRDYVSSQGPRVIIVGETDSGKSTLAKMLLSWAAKDGCKPTFVDLNIGQSSITIPGTIA ATSVEMPVDPVEGLPLHKALVHYFGHTTATNNLRLYKYLVEELARELEAEFAIKAESRRS GMVIDTMGWTSGLGYQLLLHAIRTFNASLVIVLGQETELVYDLNKAFKFKKNVQILNLER SSGVFSRYSDFRKMLRNNSIQRYFSGATNNLTAYTKTANFTDMQVYRIGALIEKSRSTEP LRITPVLIDKDLVNTVLAISYAKQPHHIISSIVAGFVYITDVDLGEERIKYLCPSAAELP SKIFIMGTLTWHKT NT seq 1305 nt NT seq  +upstreamnt  +downstreamnt atgtcatactgtggtctgtcgatgaacagtgatgcaactacggcttctactgagtttagt cctcaagtaagacgagtgaagttagagaaacaaagcgaaatcagaattcatgtgacccag atttcgcctctgaaactccgtgttctccatggccaagttgagatttttggttccgagctt ccacgaaacgtctggctcacgtttcctcctctccagcagttcgccgtctttacgtggtat ggtgcaacactcgaaatagatggcgtcacagagactgacaatacatctgttgagacacct atggtaagctatcttagtgtgcacaactctctacaagtacaaagacatcgggttacgtcc tcaacaagagattatgtttcttcacagggaccaagggttatcattgtcggagaaactgac tctgggaagagcacattagccaagatgcttcttagttgggcagcaaaagatggttgcaaa ccgacctttgttgaccttaatatcggacaaagctcgataaccataccaggaactattgct gctacatctgttgaaatgccagtggatcctgttgaaggactacctcttcataaggccctt gtgcactattttggtcacaccacagcgaccaacaaccttaggttgtacaaataccttgtt gaagagcttgctcgagaattagaagcagagtttgctattaaggctgaatctcgacgttct ggtatggtgattgacacaatgggatggacaagtggtcttggttatcagcttcttctccat gcaataaggacttttaatgcatctttagtcatcgtccttggtcaagaaacagaacttgtc tatgatctgaacaaagctttcaaattcaagaaaaacgtacaaatcttgaatcttgagagg tcatctggagttttctccaggtattctgattttcgcaaaatgttgaggaacaatagcatt cagagatatttcagtggagccacaaacaatctcacggcctacaccaaaaccgccaatttc actgatatgcaagtttatcgaatcggtgccttgatagagaagtcaaggtctactgaacct ttgaggatcacacctgtgttgattgacaaagatcttgtgaatacagttttggctatctca tacgctaaacagcctcatcacattatctcaagcattgttgctggatttgtgtatattacg gatgttgatcttggtgaagaaagaattaagtatctctgtccatccgctgctgaactgcct agcaagatattcatcatggggactttgacatggcacaaaacttga

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