Brassica oleracea (wild cabbage): 106341744
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Entry
106341744 CDS
T04124
Name
(RefSeq) nuclear poly(A) polymerase 2 isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106341744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106341744
Enzymes [BR:
boe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
106341744
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
106341744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
106341744
NCBI-ProteinID:
XP_013635902
UniProt:
A0A0D3C248
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All DBs
Position
C4:complement(43277793..43282459)
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AA seq
771 aa
AA seq
DB search
MVGTQALKSYGITKPLSVSGPSAADLKRNLELEKFLVDEGLYESKEETMRREEVLGRIDQ
IVKDWVKELTHQRGYSDQMTEDANALIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDF
FIILRDILAEMEEVTDLQPVTDAHVPVMKFKFQGISIDLLYASISLLVVPQDLDISNSSV
LSDVDEQTVRSLNGCRVADQILKLVPNFEHFRTTLRCMKYWAKRRGVYSNVTGFLGGVNW
ALLVARLCQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCAIEEDELGIPVWDPRKYHRDR
YHLMPIITPAYPCMNSSYNVSQSTLRVMMEQFQYGNKICQDIELNKQHWSSLFEQYMFFE
AYKNYLQVDVLAADAEDLLAWKGWVESRFRQLTLKIERDTNGMLMCHPQPNEYVDTSKQF
RHCAFFMGLQRAEGFGGQECQQFDIRGTVDEFRQDVNMYMFWRPGMDVFVSHVRRRQLPP
FVFPNGYKRFRQSKPQNQQGGEPGEPVESLSANVERHAKRKNDNELMDTRPEKPEKRASV
SPPSVDVVSPECSAITTGGTPPIGIVSGPRAECLVISDIGCSIPNVEVEAEKLINNSTEI
INVSQNEHNSGSKQNVEVDNRSLVQGCRDPSVVVTCEGGQNKEKGRVVGSESINDTDKQR
LPRRPNLKEDVDRVERESMLGEIADGVLQNGLCGRNLDHEGFLAAASLDSSGEHRNLHSD
GLLKSGLSEELQRNNLLMGMGRPEDGARSESLQNSLMRHVLLQPIVNLCKS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggtgggaactcaagctcttaaaagctatggaatcacgaagccgctttctgtttctggt
ccttccgcggctgatttgaagcgtaatttggagctggagaagtttctggttgatgagggg
ctgtacgagagcaaggaggaaaccatgcggcgagaggaagttcttggacgcattgaccag
attgtaaaagactgggtgaaagagttgactcatcagaggggatattcagatcagatgacg
gaggacgctaacgctctcattttcacttttggatcttaccgccttggagtgcacggacct
ggggctgatattgatactttatgtgttggcccatcttatgtcaaccgagaggaggatttc
ttcatcatcttgcgtgatatattggctgagatggaagaggtgactgaccttcaacctgtt
accgatgcccatgtccctgtcatgaaatttaagttccaaggaatatcgattgatcttctc
tatgctagcatatcacttcttgttgtgccacaggatctggatatctcaaactcttctgtg
ctttctgatgttgatgagcaaactgtccgcagtctcaatggttgtagggttgctgatcaa
attcttaaactcgttccaaattttgagcacttccggacaacattaagatgcatgaagtac
tgggctaagaggcgtggggtctattcaaatgttactggatttcttggtggcgtaaactgg
gcgcttctggttgcacgcctgtgccagctttatccaaatgctattcccagtatgttggtt
tctcgattctttagagtgtatacacaatggcgttggccgaatccagtcatgctttgtgca
atagaagaggatgagcttgggattcctgtctgggatccacgaaagtatcaccgtgaccgc
tatcatcttatgccaataataactcctgcttacccatgcatgaattctagttacaatgtc
tcccagagcactcttcgtgttatgatggagcaattccagtatggtaacaagatctgtcag
gatattgagttaaacaaacaacactggagttccttatttgagcaatatatgttcttcgag
gcatataaaaattaccttcaggttgatgtactagcagcagatgcagaagatttattggct
tggaagggttgggtggagtcaaggttccggcagctgaccttgaagatagaacgagacaca
aatgggatgttaatgtgccatcctcaaccaaatgagtatgtggacacttccaagcagttt
cggcattgtgcttttttcatgggcttgcaaagggcagaaggatttggtggccaagagtgt
caacagtttgatatacgtggaaccgtggatgagttcaggcaagacgtaaacatgtatatg
ttttggagacctgggatggacgtatttgtttctcatgttcgtagacggcagctcccacct
tttgttttcccaaacggatataaaaggtttcggcaatccaagccccagaatcaacaaggc
ggagaacctggtgagccggttgaatctttatccgccaatgttgagagacatgccaagaga
aaaaacgacaatgaattgatggatacaagaccagagaaacctgagaagcgtgcatctgtt
agtccacctagtgtagatgtagtttctcctgaatgtagtgctatcacaactggtgggact
cccccaattggcattgtttcaggtcctagagccgaatgcttagtaattagtgatattggt
tgctccatccctaatgtggaagttgaggctgaaaaattgatcaataacagcactgaaatt
ataaatgtttctcaaaatgagcataactctggtagcaagcaaaacgtggaagtggataat
aggtctctagttcaaggctgccgtgatcctagtgttgtggtaacatgtgaaggtgggcag
aataaagaaaaaggtcgtgttgtgggctctgaatccatcaatgacactgacaagcaacgt
cttccaaggagaccaaatctgaaagaggatgttgatagagttgagagggaatccatgtta
ggagaaattgctgatggtgttttgcagaatggattatgtgggcggaaccttgatcatgag
ggttttttggctgctgcaagtttggattcatctggggaacatagaaacttgcattcagat
ggattgttgaaaagtggtttgtcagaagaacttcagagaaataatttactcatggggatg
gggaggccggaagacggagctaggtcagaatctttgcagaattcactgatgaggcatgta
cttttgcaacccattgttaatttatgcaaatcatga
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