Brassica oleracea (wild cabbage): 106341745
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Entry
106341745 CDS
T04124
Name
(RefSeq) tryptophan--tRNA ligase, chloroplastic/mitochondrial isoform X1
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106341745
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
boe01007
]
106341745
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106341745
Enzymes [BR:
boe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
106341745
Amino acid related enzymes [BR:
boe01007
]
Aminoacyl-tRNA synthetase
Class I (G)
106341745
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
106341745
Prokaryotic type
106341745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
DUF249
Motif
Other DBs
NCBI-GeneID:
106341745
NCBI-ProteinID:
XP_013635908
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Position
C4:43283845..43286777
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AA seq
396 aa
AA seq
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MAHATLSHSLILSSSRFSRLGYSTRFLRHANPLSLPLTRQRFRCYCSDQTSPSVRKRVVS
GVQPTGSIHLGNYLGAIKNWVALQDTYETLFFIVDLHAITLPYDPQELRKATRDTAALYL
ACGVDISKASVFVQSHVRAHVDLMWLLSSSTPIGWLQKMTQFKEKSRKEGGENASVSLLT
YPVLMAADILLYKSDFVPVGEDQKQHLELARDLAQRVNNLYGGRKWKKLGGRGGSVFKIP
EPLIPQVGARVMSLTDGRSKMSKSAPSDQSRINLLDSKDLIADKIKRCKTDSFVDSLEYD
NAERPECNNLLSVYQIVSGKTKEEVMEECKDMSWGTFKPLLKDAVVEHLSPIQVRYQEIT
AESAYLDKVLTEGADKATEIAEVTIRNLKQAMGFYI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgcgactctctctcactccctcatcctctcttcctccaggttctctcgtctc
ggctacagcaccagatttctcagacacgcaaaccctctttctcttcccctaaccagacaa
agattccgatgttactgttccgaccagacttctccttctgtaaggaaacgtgtggtctct
ggagtccagcctacaggctcaattcaccttggaaactatctaggcgctatcaagaactgg
gtcgcccttcaggatacatatgaaacactctttttcattgtagaccttcatgcgataaca
ctaccatatgacccgcaagaactgagaaaggcaactagggataccgcagcgctctatcta
gcatgtggtgttgacatttctaaggcttcggtgtttgtgcaatctcacgtccgtgctcat
gtggacttaatgtggcttttgagttcatccacacctattggttggctacagaaaatgact
cagttcaaagaaaaatcacgcaaggaggggggtgagaatgcttctgtgtctttgttaaca
tatccagttctgatggctgctgatatcctcttgtataagtcggattttgtccctgtgggt
gaggaccagaagcagcacctagagcttgcccgcgacctggcacagcgtgtgaataattta
tatggtggaaggaagtggaagaagcttggagggcgtggtggttcggtatttaagatacca
gaaccactcataccacaagttggagctcgagttatgtctcttacggatggtcgttccaag
atgtccaagtctgcaccttctgatcagtcccggatcaatctccttgactcaaaagatttg
attgcggataaaataaaacggtgcaagacagactcatttgtagacagccttgaatatgac
aatgcggagaggcctgagtgcaacaatctcctctctgtatatcagattgtctcaggcaag
acaaaagaggaagtgatggaggaatgcaaagatatgagctggggcacatttaagcctctg
cttaaggatgctgtggtcgagcatcttagtccaatccaggtccgttatcaagagataaca
gcagagtcagcgtatttggataaagtattgacagaaggtgcggacaaagccacggagata
gcagaagtcacaattcgcaatttaaaacaagcgatggggttctatatatga
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