Brassica oleracea (wild cabbage): 106341789
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Entry
106341789 CDS
T04124
Name
(RefSeq) probable sphingolipid transporter spinster homolog 3 isoform X1
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
boe02000
]
106341789
Transporters [BR:
boe02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
106341789
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GFIT
Motif
Pfam:
MFS_1
OATP
Motif
Other DBs
NCBI-GeneID:
106341789
NCBI-ProteinID:
XP_013635961
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Position
C4:40872830..40875951
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AA seq
549 aa
AA seq
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MVTKEEDCLPPATEPSRCYSPSTTPPPELETIRSLEIVESSFLSPVWLLVIFCIINLLNY
MDRGAIASNGVNGSTKSCNDKGKCTPATGIQGHYNLSNFEDGVLSSSFMVGLLIASPVFA
SLAKSFNPFRLIGVGLTVWTVAVVGCGSSFAFWFIVLCRMFVGVGEASFISLAAPFIDDN
APHKQVSVFSFLFCTSYAPFLASKWFLQKAAWIGLFYMCIPSGVALGYVYGGYVGKHFSW
RYAFWGEAVLMAPFAVLGFLIKPLQLKGFHSTDSVEVMASSLGAEVSKNNNHLQAGNEIK
HDEVEVSIEIGRSSYANAVWKSITQFARDMKVLCKERVFVVNVLGYVAYNFVIGAYSYWG
PKAGYNIYKMKNADMIFGAVTIICGIVGTLSGGLILDHVTSTIPNAFKLLSGATFLGATC
CFTAFTLKSLYGFVALFAIGEILVFATQAPVNYVCLHCVEPSLRPLSMAISTVAIHIFGD
VPSSPLVGIVQDRIDSWRKTALILTSVLFLAAAIWFIGMFINIVDRFNEEAESENPRSRQ
EQSIMVMNP
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccaaagaagaggattgtcttcctccagcgacagagccgtcgagatgttattca
ccttctacgactcctcctccagagctagagactattcgaagcttagaaatcgtggaatca
tcctttctctctcccgtttggttactagtgatcttttgcatcattaacttattaaactac
atggatcgaggtgcgatagcaagcaatggtgttaatggaagtaccaagagttgtaatgat
aagggcaaatgcactcctgcaactggaattcagggacattataacctaagtaattttgaa
gatggtgtattgtcatcttccttcatggttgggcttcttattgcatccccagtctttgct
tcattggcaaagagcttcaatccatttagacttattggagtaggtttaactgtttggact
gttgcagttgtcggctgtggcagttcctttgccttttggtttatcgtcttatgtcgcatg
tttgttggtgtaggtgaagcttctttcattagtcttgcagctccatttatagatgataat
gctcctcataaacaggtttctgttttctcttttttgttttgcacttcatatgcaccattt
ctggcttctaaatggtttcttcagaaagctgcatggattggactgttttacatgtgtata
ccaagtggtgttgctcttggttatgtctatggcggatacgtcggaaaacattttagctgg
cgctatgcattttggggagaagcggttttaatggctccattcgctgttcttggtttcttg
ataaaacctttgcagttaaaagggttccattctactgattcagttgaagtaatggcttca
tcactaggtgcagaggtatcgaaaaacaacaaccatcttcaagctggtaatgagattaag
catgatgaagttgaggtctctattgagattggcaggtcaagttacgctaacgcagtttgg
aaatcaataactcaatttgcgagagacatgaaagtcctatgcaaagaaagggtctttgtt
gttaatgtcttaggttatgtagcatacaattttgttattggtgcatattcatactgggga
ccaaaggccggttataacatttataaaatgaaaaacgctgatatgatctttggggcagta
actatcatttgtgggatcgttggaacattatcaggtggtttaatactagatcatgtcact
tctacaattccaaatgctttcaagctcttatccggagcaacatttctcggggcgacatgt
tgctttactgcattcaccttgaagagtttatacggtttcgtagctcttttcgcaatagga
gagattcttgtgtttgctacacaggctcctgtgaattatgtgtgtttgcattgtgtggaa
ccaagtttaagaccactatcaatggctatctccactgtggcaattcacatatttggcgat
gttccatcttcgccacttgtcggtattgttcaggatcgtatcgacagttggagaaaaaca
gcgttgattcttacatcggttctgttcttagctgctgcaatatggtttatagggatgttc
ataaacattgtagatcgctttaacgaagaagctgaaagtgagaacccgagaagcaggcaa
gaacaatcgattatggtgatgaatccataa
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