Brassica oleracea (wild cabbage): 106341808
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Entry
106341808 CDS
T04124
Name
(RefSeq) piezo-type mechanosensitive ion channel homolog isoform X1
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106341808
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
boe04040
]
106341808
Membrane trafficking [BR:
boe04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
106341808
Ion channels [BR:
boe04040
]
Other channels
Mechanosensitive channel (Piezo)
106341808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_cap
Piezo_THU9_anchor
THU_Piezo1
Motif
Other DBs
NCBI-GeneID:
106341808
NCBI-ProteinID:
XP_013635988
LinkDB
All DBs
Position
C4:complement(53696250..53707485)
Genome browser
AA seq
2481 aa
AA seq
DB search
MASFLLGFFLPSLLLAASLINWSLISFFDLIAFLLLHYIAPEIGYRFRRRHWLLWPIFIF
SFAVLVAQALYLVLWATVGQHWDTSDSAWMSVIGFIILKSWRNPTVLYFLALQLLASLVA
LADIYSSRFGFVRWPWSRFSELFEQLGSHLRVASCLLLPAVQLALGICNPSWVSLPFFVG
SCAGLVDWSLTSNVSGLFRWWRVLYIYAAFNIVLLYLYQLPINFSDMIRWIASFIGLFRI
SAETEGTDICSGLFLLLFYTMLSYIRSDLEDMDFIMSTSENNLAERLLPPKYSFFIRESR
AGVRHTNVLLRGAVFKTFSINFFTYGFLVSLFALSFWSFHFASLCAFGLLAYVGYIIYAF
PSLFRLHRLNGLLLVFILLWAVSTYIFNVAFSFLNTKAGKDMKIWEMVGLWHYTIPGFFL
LAQFGLGMLVALGNLVNNSVFLYLSEESSRSSNDRSYAEADEETKVLVVATIAWGLRKCS
RAIMLALIFLIAMKPGFVHAVYVIFFLMYLLSHNINRKIRKSLILLCEVHFALLYILEID
LVSNSLKRQGSVSREILFQLGLLRSESSWDFLEIALLACFCALHNHGFEVLFSFSAIVRH
TPSPPIGFSILKAGLNKSVLLSVYSSPSSSYSQDNTTYERHIASFLSAIGQKFLSMYRSC
GTYIAFITILISVYLVKPNYVSFGYIFLLLFWITGRQMFEETKRRLWFPLKAYAVLVFMF
IYCLSSFVSFQLWLSGYIDLYFYLGYNSEAPLLDNVWESLAVLIVMQLYSYERRQNGHYI
PGQSSLVHPGVFGFLERFLVWHGQKILFAALFYASLSPISVFGFVYLLGLVICTTFPKSS
SVPSKSFLIYTGFLVSAEYLFQLWGMQAQMFPGQRYAELSFYLGLRVYEPGFWGIESGLR
GKVLVVAACTLQYNVFRWLERTPGLTIMKGKYEEPCPLFVSAEDTTASVSSSNGETPSSI
DHASISIKQGEATSNSWPFFSPRDNQAAGFLHPKTGGSESGSSKKFSFGHFWGSIKESHK
WNKRRILALKKERFEMQKNLLNIYLKFWIENMFNLYGLEINMIALLLASFALLNAISLVY
IALLAACVLLRRRLIQKLWPVVVFLFASILAIEYVATWNNLLPLDQDPSETSVHCHDCWS
IAAVYLKFCRDCWLGVRVDDPRTLISYFVVFMLACFKLRADQISSFSESSTYHQMKSQRK
NSFVWRDLSFETKSMWTVLDYLRLYCYVHLLDVVLILILITGTLEYDILHLGYLAFALVF
ARMRLEILKKKNKIFRFLRVYNFVLIIFSLAYQSPFVGNFNDGKCETVDYIYEVIGFYKY
DYGFRITARSALVEIIIFMLVSLQSYMFSSQEFDYVSRYLEAEQIGAIVREQEKKAARKT
EQLQQIREAEEKKRQRNLQVEKMKSEMLNLRVQLHRMNSDSNFGFASPRTEGLRRRSSYL
IPDSGAASPEIDGVVHRKEGQPIDEDPHYPFEAHELPMSATPEAPDSPECSFGASPCEIT
EIQHNTDVMSTEREIKDKSEGKDNPLISAVQLIGDGVSQVQFIGNQAVNNLANFLNISPE
NSDINEQSSVDDEVYDEMESQNRIHKPFERSTSLQSDRSSDGTSFQIGRILRHIWSRMQS
NNDIVCYCCFIIAFLWNFSLLSMVYLAALFLYALCVHTGPTHIFWVVMLMYTEIYILLQY
LYQIIIQHCGLSIDAPLLQELGFPTQRIKSSFVVSSLPLFLVYISTLIQSVITVKDGDWV
PSADFASRRNARGSQKDLTRINWSLRVWDVYKKLRDGVKLVIRSMYRYWISLTRGAESPP
YFVQVTMDVHMWPEDGIQPERVECRMNQLLRLVHNERCEKGNPDLCPYSSRVHVQSIERS
TETPNEALVVLEVEYASPTNGCSTAEWYKSLTPASDVAKEIRKAQHSGLGEGTGFPYPIL
SVIGGGKRETDLYAYIFGADLMVFFLVAIFYRSVIKNKSEFIDVYQLVDQFPFDFVIILM
VIFFLIVVDRVIYLCSFATGKVVYYLFSLILFTYAVTEYAWSIYPTQQHAAGLALRFIFL
AKAMSLALQAIQIRYGLPHKSTLYRQFLTSEVSRINYYGYRLYRALPFLYELRCVLDWSC
TATSLTMYDWLKLEDVNASLYLVKCDTVLNRATHKHGERQTKMTKCCNGICLFFILLCVI
WAPMLMYSSGNPTNIANPIKDASVQIDIKTAGGKLTLYQTTLCERISGDNIDLGLDLRSQ
SFLPTYNKNDIQLISCQSDASVLWLVPDTVVTRFIQSLDWDTDMDITFSWLLNRDRPKGK
ETVKYERSVDPQDLPKRSEVQMVLNGSMDGFRVHNLYPKFFRVTGSGDVRSFEDQKDEVS
ADILMNHADTKWWWSFHNLKASENISACEGMNGPVAIIMSEETPPQGFLGDTLSKFSIWG
LYITFVLAVGRFIRLQCSDLRMRIPYENLPSCDRLIAICEDLYAARAEGELGVEEVLYWT
LVKIYRSPHMLLEYTKLDYDA
NT seq
7446 nt
NT seq
+upstream
nt +downstream
nt
atggcgagttttctcctcggcttcttcttgccttcgcttcttctcgcagcttcacttatt
aactggagtctcatatcattctttgatttgatagcttttctcctccttcactatattgca
cctgaaattggataccgttttcggaggaggcattggctattatggcccattttcatcttt
tcctttgcggtacttgttgcacaagcgctgtaccttgtcctttgggctactgttggtcaa
cactgggatacatcagattctgcctggatgagtgttattggctttatcatattaaagtcc
tggagaaaccccactgttctgtatttcttggctttacaacttctagcatcgctagttgct
ttagctgacatatacagttctagattcggcttcgttcggtggccatggtctcgcttttca
gagcttttcgagcagctaggaagtcatcttagggttgcctcctgcttgttgttaccagct
gttcaattggcactgggaatttgcaatccttcttgggtctctttgccattttttgttggc
agctgtgctggtcttgtggactggtccttgacaagcaacgtttcaggacttttcaggtgg
tggagagttctttatatctacgcagcattcaacattgtcctactttacctctatcaacta
ccaataaacttctccgatatgattcgatggatagcaagctttataggtctattcagaatc
tctgcggaaacagaaggcactgatatttgttctggtcttttccttttgcttttttacacc
atgctatcctatataaggtcagacctcgaggatatggattttatcatgtcgacgagtgaa
aataacttggcagagcgtcttcttcctccaaaatattcgttttttattcgagaatcaagg
gccggtgttaggcacaccaatgttttactgaggggagctgtgtttaagaccttcagtatc
aatttcttcacatatggtttcctggtctctctgtttgctctttcgttctggagttttcat
tttgcgagcttgtgtgcttttggcctccttgcatatgttggttacattatctatgccttc
ccatcgttgttccgcttgcacagattaaacggccttctgcttgtatttatactcttatgg
gctgtcagtacgtacatattcaatgtagcattttcttttctgaacactaaggctggaaag
gacatgaaaatttgggagatggtgggactttggcattacactatacctggattctttttg
cttgcacaatttggtttgggaatgttggttgcgttgggtaatcttgtgaacaactctgtt
tttctctacctgtctgaagagagctccagatcttccaatgacagatcttatgctgaagct
gatgaagaaacaaaggttttggttgtcgcaaccattgcttggggattgcggaaatgttca
cgggctattatgctcgcactgattttcctcattgccatgaaacctgggtttgtccatgca
gtgtatgtgatattcttccttatgtatctgctgagccacaacatcaacagaaagatacgc
aagtcactgattcttctatgcgaagttcattttgcacttctctacattcttgagatcgac
cttgtgtcgaactccttaaagcggcaaggctctgtgagcagggaaattctgtttcagtta
ggtcttcttaggtctgaaagctcttgggacttcttggagatagccttgcttgcttgcttc
tgtgctctccataatcatggttttgaggtgctattttccttctcagcgattgtacgacac
acaccgagccctccaattggatttagcatattgaaagctggtctcaacaaatcagttctc
ttgtccgtctactcatcgccatcttcaagttatagccaggataatactacttatgagaga
cacattgcttcatttctgagtgcgattgggcaaaagtttctgtctatgtaccgatcatgt
ggaacatacattgccttcatcactattctcataagtgtatacctggtgaaacccaattat
gtatcgtttggatacattttccttctcttgttctggattactggaagacaaatgtttgag
gaaactaagagacgcttgtggttccctttgaaagcatatgcggttttggtgtttatgttt
atctactgcttaagtagctttgtcagcttccagctctggttatctggatatattgatcta
tacttttatttaggttacaactccgaagcaccattgctggataatgtatgggaatctctt
gctgtgttgatcgtgatgcaactttacagctatgaaaggaggcagaatggacattacatt
ccaggtcaatctagtttggttcatcctggagtttttggttttcttgagaggtttttggta
tggcatggtcagaagatcttgttcgcggcattattttatgcatcattgtctccaatcagt
gtgtttggatttgtgtatctcctcggccttgtcatctgcacaaccttcccaaagtcctct
tcagtaccatccaaatcatttttgatctatactggatttctcgtgtctgctgagtatctt
ttccaactgtggggcatgcaagctcaaatgttccctgggcaaagatatgctgagttgtct
ttctacttgggccttcgagtatatgaacctggattttggggtatagaatcgggtctacga
ggcaaagtgctagttgttgctgcctgtactctgcagtacaatgtatttcgttggctagaa
aggacacctggtttaactattatgaaaggaaaatatgaagagccttgtcccctatttgtc
tctgcagaagacacaactgcaagtgtttccagttctaatggtgaaaccccatcttccata
gatcatgcttctatatcaattaaacaaggcgaggctactagtaactcatggcctttcttc
tctccccgtgataatcaggcagctggtttcttgcatcccaagactggaggctccgaaagt
ggcagtagtaagaaattttcatttggtcatttctggggaagcatcaaagagagtcacaag
tggaacaagaggcggattctggcattgaagaaggagaggtttgaaatgcagaagaatctg
ttaaatatttacttgaagttttggattgagaacatgtttaacctctatggccttgagata
aacatgatagcgctgcttcttgcaagttttgctttgctgaatgccatctccttggtatat
attgcgctgcttgctgcgtgtgtcctcttgagaagacgcctaattcagaaactatggcct
gtcgttgtttttctgtttgcatcaattctagcaattgaatacgttgccacgtggaataac
ttattgcctttagatcaggatccaagtgaaactagcgtgcattgccatgattgctggagt
attgcagctgtctacttaaaattttgccgggactgctggctgggagtgagagttgacgat
ccccggacccttattagctatttcgtggtgttcatgcttgcctgttttaaacttcgggct
gatcagatatctagtttctcagagtcatcgacatatcatcagatgaagtctcagagaaag
aactcatttgtctggagagatctctccttcgaaacaaagagcatgtggaccgtgcttgat
tacctgaggctttattgttacgtccatctgttggatgttgtgcttattctgattctaatc
acaggaactctcgagtatgacattctacacctgggctatcttgcattcgcacttgttttt
gcccggatgcgacttgaaatactgaagaagaagaacaaaatattcaggtttttgcgggtg
tacaattttgttctcatcatcttttctctcgcatatcagtctccatttgttggaaacttc
aatgatgggaagtgtgaaacggttgattatatttacgaggtgattggattttacaagtat
gactacgggtttcgaatcactgcaagatctgctctcgttgagatcatcatatttatgtta
gtatctcttcagtcctacatgttttcctcccaggaatttgattatgtctcgcggtatctt
gaagcggagcaaattggtgctattgtgcgggagcaagagaagaaagctgcacggaaaacc
gagcaactgcaacagattcgtgaggctgaagaaaagaaacggcagcggaatttgcaggtg
gaaaagatgaagtcggaaatgctgaacctgcgggtacagcttcacagaatgaattctgat
tctaattttgggtttgcttctccgcgcactgaaggtctacgaaggaggagttcgtatcta
attccagatagtggtgcagccagtccggagattgacggagtggtccacaggaaagaaggc
cagcctattgacgaggatccacattatccttttgaagctcatgagcttcctatgagtgcc
actccagaagcaccagattctccagagtgttcatttggagcatctccttgtgagatcact
gaaattcaacacaatactgatgtcatgtctacggagcgtgaaataaaagataagtcagaa
ggaaaagataatcccttgatttctgctgtgcaactcatcggtgatggtgtttcccaggtg
caatttattggaaatcaggcagtaaataaccttgcgaatttcttaaacatctcaccagaa
aattcagatataaatgagcagtcctctgttgatgatgaggtgtatgatgagatggaaagc
cagaatagaatacacaaaccttttgaacggtcaacatctctacagtctgacaggagtagt
gatggcactagctttcagataggaaggatccttcgtcatatatggtctaggatgcagtcc
aacaatgatattgtttgctattgctgcttcattattgcgtttctgtggaacttcagtctt
ctttccatggtctatctagcagcgctgttcctatatgccctctgcgttcacactggacct
actcacatcttctgggtcgtcatgctaatgtacacagaaatctatatcctcctccagtac
ttataccagattataatccagcactgtgggttgagtattgacgcaccacttcttcaagaa
ctgggatttccaacgcaaagaatcaaatcatcttttgttgtcagctcgttgcctctcttc
cttgtttatatatccactctcatacagagtgttataacagtgaaagatggtgactgggtt
ccttctgctgattttgcttctcgccggaatgcccgtgggagccagaaggaccttacaaga
attaactggagcctgagagtttgggacgtgtacaagaagctgagagatggtgtgaaattg
gtgatcagaagcatgtaccggtactggatctctctgacacgtggagcagaatcccctcct
tactttgttcaggtgacaatggatgttcacatgtggcctgaagatggaattcaacctgaa
agagttgaatgcagaatgaatcagttacttaggcttgtccataatgagagatgcgagaag
ggaaaccctgatctttgtccttactctagcagggtccacgtacaaagtattgagagaagt
acagagaccccaaacgaggccttggttgttctcgaggttgagtacgcgtctcccacgaat
gggtgttctacagcagaatggtacaaatcactaaccccagcctcggatgtggcgaaagag
attcgtaaagctcaacatagtggacttggtgaaggaactgggtttccgtaccccattctc
tctgtgattggcggaggaaagagagaaacagacctctatgcctacatatttggtgctgat
ttgatggtcttctttctggttgccattttctaccgatccgtcatcaaaaataaaagcgag
tttatcgatgtatatcagctagtggaccagttcccatttgactttgtcattattctaatg
gttatcttcttcctgattgttgttgatcgggtcatctatctttgctcctttgcgactgga
aaagtggtgtactacctcttcagtcttattctcttcacatatgcagtgacagagtatgct
tggagcatatatcctacgcagcagcatgctgctggcttggctctcagattcatatttctt
gccaaagcaatgtcactagctctccaggccatacaaatccgctatgggctacctcataag
agcaccttatatcggcagtttttgacaagtgaagtttcacggatcaattactatggctac
aggctttaccgtgctcttccttttctgtatgaactgagatgtgtacttgattggtcctgc
acagcgacatcactgactatgtatgactggctcaagttggaagacgtaaatgcgagtttg
taccttgtcaaatgcgatacagttttaaatcgtgctacacacaaacatggagagaggcaa
acaaaaatgactaaatgctgcaacgggatatgtctgttcttcatcttgttatgcgttatc
tgggctcctatgctgatgtatagcagtggtaacccaacaaacatcgccaatccgataaaa
gatgcgagcgttcagattgatataaaaacagctggtggaaagcttactttgtaccaaaca
accctgtgcgagagaatttcaggggataacattgatctcgggctagatctccggtcccag
agcttcttgccaacgtacaacaaaaatgacatccagctgataagctgccaatctgatgca
agcgttttgtggcttgtccctgacacagttgtgaccagattcattcaatcccttgactgg
gacacagatatggacatcaccttttcttggcttcttaacagagaccgacctaaaggtaag
gagactgtcaagtacgaaagaagtgtggaccctcaggaccttccaaaacgctctgaggtg
caaatggttctcaacggctcaatggatggatttagagtgcataacttgtacccaaagttt
ttccgtgttactggttctggtgatgtcaggtcttttgaagaccagaaggatgaagtgagt
gcagacatactcatgaaccatgcagataccaagtggtggtggtcattccataatcttaag
gcgtctgaaaatattagcgcttgcgagggtatgaatggaccagttgctatcataatgtct
gaggaaactcccccacaggggtttctgggtgacacgctcagcaaattcagtatatgggga
ctctatataacatttgtactagcagtcgggcgtttcatcaggcttcaatgctctgacctg
cgtatgagaataccatacgagaacctcccttcgtgtgacagattaatagcaatatgtgag
gacttatacgcggcgagagcagagggtgagcttggagtagaagaagttctatactggacc
cttgtgaagatctatagatctccacacatgctgcttgagtatacaaagctagactacgat
gcttag
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integrated database retrieval system
