KEGG   Brassica oleracea (wild cabbage): 106341912
Entry
106341912         CDS       T04124                                 
Name
(RefSeq) UBP1-associated protein 2B
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    106341912
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:boe03019]
    106341912
   03041 Spliceosome [BR:boe03041]
    106341912
Messenger RNA biogenesis [BR:boe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     106341912
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     106341912
Spliceosome [BR:boe03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    106341912
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_Nup35 Cut8 MSP1_C
Other DBs
NCBI-GeneID: 106341912
NCBI-ProteinID: XP_013636116
UniProt: A0A0D3C5K3
LinkDB
Position
C4:51349512..51353560
AA seq 444 aa
MADKKRKLEPQSSDATEPPQKQQQQLQSENGGEEIIITEIHKNENDDDRDDNQRPDGDDD
EEPIEDLLEPFSKEQLSILLKEAAQKHPDVADRIRIAADEDPVHRKIFVHGFGWDTKADA
LIKAFKQYGEIEDCKCVVDKVTGQSKGYGFILFKSRSGSRSALKQPQKKIGTRMAACQLA
SMGPVQGGNSVAAAGATSQHFNPEHVQRKIYVSNVSADIDPERLLEFFSRFGEVEEGPLG
LDKATGRPKGFTLFVYKTAESAKKALEEPHKSFEGHVLHCHKANDGPKPVKQQHQQQHRH
SSYDQGSRYRRDDNAGYGASGGHGHFLGGNGNNQGLNPAIGQAITALLASQGAGVGMNQA
FGQALLGTLGAPSPGTGGGVPSGYGGQANITPGVFPGYGYEAGFQGGYQTQLPGQGGYQT
QQPGQGSAGRGQHGLGYGGQYMGQ
NT seq 1335 nt   +upstreamnt  +downstreamnt
atggcggataagaagagaaagctcgaacctcaatccagcgacgccacagagccgccgcag
aagcagcagcagcagctccaatccgaaaacggcggcgaagaaatcatcatcacagagatc
cacaaaaacgaaaacgacgacgacagagacgataatcaacgccccgatggcgacgacgac
gaagagccaatcgaagatctcctggaaccgttctcaaaggaacagctctcgattctcctc
aaggaagctgctcaaaagcaccccgacgtcgccgatcggatccggatcgcggcggacgag
gatccggttcaccgcaagattttcgtccacgggttcgggtgggacacgaaggccgacgcg
ctcatcaaagcgtttaagcagtacggagagatcgaggactgcaaatgcgtcgtggacaag
gtcacgggacagtccaaaggatacggattcatcctcttcaagtcgcgttcgggctctcgc
agcgctctcaagcagcctcagaagaagatcgggactcgtatggctgcgtgtcagttagct
tccatggggcctgttcagggagggaactctgtggcggcggcgggggcgacgtctcagcat
tttaaccctgagcatgtgcagaggaagatctatgttagtaacgttagcgcggatattgat
ccggagaggttgttggagtttttctctaggtttggggaggttgaggaaggtccgttgggg
cttgataaagctactgggaggcctaaaggtttcactttgtttgtttataagactgcggag
agtgctaagaaggcgttggaggagccgcataagagctttgaaggccatgtgctgcattgc
cataaggctaacgatgggcctaagcctgttaagcagcagcatcagcagcagcatcgccat
agctcttatgatcaaggttcgcgttaccgaagggatgataacgctggttacggtgcaagt
ggaggtcatgggcatttcttaggtggtaatggtaacaatcaggggttgaacccagccatt
ggccaggcgattacagctttgttggcgtctcaaggggctggagtaggtatgaaccaagca
tttggacaggctttgttggggactttgggggcgcctagcccaggaactggaggtggagtg
ccaagtggctatggtggtcaagcgaatatcacaccaggggtgtttcctgggtacggttac
gaagccggttttcagggaggttatcagactcagcttcctggtcagggcggttatcagact
cagcaacctggtcagggtagtgctggaagagggcagcatggtttagggtacggtggtcag
tacatgggtcaatag

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