KEGG   Brassica oleracea (wild cabbage): 106341958
Entry
106341958         CDS       T04124                                 
Name
(RefSeq) protein transport protein SEC31 homolog B isoform X1
  KO
K14005  protein transport protein SEC31
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106341958
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:boe04131]
    106341958
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:boe02044]
    106341958
Membrane trafficking [BR:boe04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    106341958
Secretion system [BR:boe02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   106341958
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_EML_2 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WD40 WDR55 TPR_Sec16 Beta-prop_EIPR1 TPR_GEMI5 Beta-prop_EML MIOS_WD40 Beta-prop_DCAF4 EIF3I SRA1 Beta-prop_SCAP Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5
Other DBs
NCBI-GeneID: 106341958
NCBI-ProteinID: XP_013636172
UniProt: A0A0D3BW24
LinkDB
Position
C4:24301957..24308133
AA seq 1107 aa
MACIKGVGRSASVALAPDAPYMAAGTMAGAVDLSFSSSANLEIFKLDFESDDRELTLVGE
ISSSERFNRVAWGRNGSGSEEFSMGLIAGGLVDGNIDLWNPLSLTGSKSSENALVGHLSV
HKGPVRGLEFNAFTPNLLASGADDGEICIWDLTKPSEPSHFPLLKGTGSATQGEISFISW
NRKVQQILASTSYNGTTVIWDLRKQKPIINFADSVRRRCSVLQWNPDIATQIMVASDDDS
SPTLKLWDMRNTMSPVREFTGHQKGVIAMEWCPSDSSYLLTCAKDNRTICWDTNTAEIVA
ELPAGNNWNFDVHWYPKIPGVISASSFDGKIGIYNIEGCSRYGAEENTFGTAPLRAPKWY
KRPVGASFGFGGKLVSFHAKAPVKGASGIPSELFLHSLVTEQSLVSRTSEFDAAIENGDK
TSLRGLCEKKSEETESEEEKETWGLLKIMFEDEETTRTKLISHLGFSLPSVEKDQAVEGL
SSDLNGIGLEDTAAHALEPLETNEAAAFAMDNGEDFFNNFPAKPDTPVSTASAKDFTPPE
ADFTGKLEETQEMPEEEEESSDLVFDDAIQRALVVGDYKEAVDQCISAKKMADALVIAHV
GGTSLWESTREKYLKTSRAPYMKVVAAMVNNDLTSLIYTRSHKFWKETLALLCTFAQGEQ
WATLCDVLASKLMDAGNTLAAVLCYICAGNVDRTVEIWSRSLANERDGRSYAELLQDLME
KTLVLALATGNKKFSASLCKLFESYAEILASQGLLTTAMKYLKVLDSGGLSPELSILRDR
ISLSAEPETNTAASGNIQLQSTIPYNQEPTQAQPNIISNPYDNQYQQPYTDSYVGGYVPP
ASHPPMQQATMFMPHQAQPAPQPSYPPGPASNAQPSMRTTFVPSTPLALKNADQYQQPTI
ASHSFTGPSNNAYPVPPGTGSYASSGPSQIGQYPNPKMPQVVGPGAGPIGFTPMSTPGVV
PRSVIGSVQPASPQTQQAAPAPAAPPPTVQTADTSNVPAHQKPVIATLTRLFNETSEALG
GARANPTKKREIEDNSRKLGALFVRLNSGDISKNAADKLAQLCHALDNQDFGAALQIQVL
LTTSEWDECNFWLSTLKRMIKGRQNMR
NT seq 3324 nt   +upstreamnt  +downstreamnt
atggcttgcatcaagggggtggggagatccgcctccgtggctctggctcccgacgctcct
tacatggcggccggaaccatggccggagcggtggatctgtcctttagttcttcggccaac
ctggagatattcaagctggatttcgagtctgacgatcgcgaattgacactggtgggggaa
ataagcagctcggagcgcttcaatagagtggcatggggaagaaacggatctggttcagag
gaattctccatgggtctaattgcgggcgggcttgtggatggaaatatagatctctggaat
ccgctttctctaaccggttccaagtccagtgaaaatgcactcgttggacatctttcagtt
cacaaagggcccgttcgtggtcttgagttcaatgctttcaccccaaatctactcgcctct
ggcgctgatgatggtgaaatttgcatttgggatttaactaagccttctgagccttctcat
tttccacttctcaagggtactggttctgctactcaaggtgaaatctcctttatttcgtgg
aacagaaaagttcaacagatattagcctctacctcctacaatgggactactgtaatatgg
gacttgaggaagcagaagccgataattaactttgcagattctgttcgacgtcggtgctct
gttttacaatggaaccctgacattgctactcagataatggtcgcatcagatgacgacagt
tcacctactctcaagctctgggacatgaggaatacaatgtcacctgtgcgcgagtttact
ggacaccaaaaaggtgtgattgcaatggagtggtgtccaagtgacagttcatatcttctt
acctgtgctaaagacaaccgaactatttgctgggacactaatacagcagagattgtagcc
gagttacctgctggcaacaattggaattttgatgttcattggtacccaaagattcctgga
gttatatcagcatcttcatttgatgggaaaattggcatctacaacatcgagggttgcagt
cgctatggtgctgaagagaatacttttggtactgctcctttaagagcaccaaaatggtat
aagcgcccagttggtgcatcctttggatttgggggaaaacttgtatcctttcatgcaaag
gccccagtgaagggtgcctcaggcattccatctgagctttttctgcacagcctggtgaca
gaacagagtttggtgagtcgaacttctgaatttgatgccgcaatagaaaatggtgataag
acttctctacggggtttgtgtgagaagaaatctgaagagactgaatccgaagaggagaag
gagacatggggcttgctgaaaatcatgttcgaagatgaagaaactacaaggacaaagttg
atcagccatctcggctttagtttgccttctgtggaaaaggatcaggcagtggaagggctc
tcgtcagatctaaatggcattggattagaggatactgcggcgcatgcactggagcctttg
gaaactaacgaggcagctgcttttgctatggacaatggagaagacttctttaacaacttt
cctgctaaacctgatacacctgtatctactgcatctgccaaagattttacgcctcctgag
gcagattttactggcaaattagaagaaacccaagaaatgccagaagaagaggaagaaagt
tctgacctagtatttgatgatgctatccagcgtgctttagttgttggagattacaaggaa
gcggtggatcagtgtatatctgcaaagaagatggctgatgctttagttattgctcatgtt
ggtggtacatctttgtgggagagcactcgtgagaaatatctaaagacaagcagggcacct
tacatgaaggttgttgctgcgatggtaaacaacgatctcacgagccttatctatacaagg
tcacacaagttctggaaagaaactcttgccctcctctgtacttttgcacaaggagaacaa
tgggccaccctgtgcgatgtacttgcctcaaagttgatggatgctggtaacactttggct
gcagtcctgtgctacatttgtgcaggaaatgttgacagaacagtagaaatttggtcaagg
agccttgcaaacgagcgtgatggaagatcttacgctgagcttcttcaagatcttatggag
aagactcttgttcttgctttggcaactgggaacaaaaagttcagcgcatctctttgtaaa
ctctttgagagttatgctgagatattggccagccaagggcttcttacaacggcaatgaag
tacttgaaagttttggattctggtggcttgtcacctgaactttctatattacgtgatcgt
atttccctctctgcagaacctgagactaacactgcagcttcaggcaacattcagcttcaa
agcaccataccatataatcaggagccaacgcaggcgcaaccaaacattatcagtaaccca
tatgataatcagtatcaacaaccatacaccgattcttatgttggaggatatgtgccccca
gcttcacatccaccaatgcaacaagcaaccatgtttatgcctcaccaagctcagccagca
ccgcagccatcatatcctccggggcctgcaagcaatgctcagccatccatgagaactact
tttgttccttcaactccccttgcactgaagaacgcagaccaatatcagcagccaaccatt
gcttctcattcattcaccggaccatctaacaatgcataccccgttcctcctggtactggt
tcatatgcatcttctggcccttcacaaattgggcaatatcctaaccccaagatgccccaa
gtagttggtccaggagctggacccataggatttacacctatgtcaactccaggagttgtt
ccaagatctgttataggttctgtgcaaccagcaagtcctcaaacacagcaggcagcccct
gcccctgcagctccgccaccaactgttcagactgcagatacttccaacgtcccagcgcac
cagaaacctgtgatagcaacattgacgaggcttttcaatgagacatcggaagcactggga
ggcgcacgtgcaaatcctaccaagaagcgtgagatagaagacaactcaagaaaattaggt
gctctgtttgtgagactgaatagcggagacatctccaagaatgctgccgacaaacttgca
cagctctgccatgcgctggacaatcaggacttcggtgcagcccttcagatacaggtactt
ctgacgaccagcgaatgggatgaatgcaacttctggctttcgacattgaagcggatgatc
aaaggcaggcaaaatatgcggtga

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