KEGG   Brassica oleracea (wild cabbage): 106342021
Entry
106342021         CDS       T04124                                 
Name
(RefSeq) syntaxin-43-like
  KO
K08489  syntaxin 16
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    106342021
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:boe04131]
    106342021
Membrane trafficking [BR:boe04131]
 SNARE
  Syntaxin (Qa)
   Stx-TGN / EE
    106342021
SSDB
Motif
Pfam: SNARE Syntaxin_2 Prominin FlxA MCPsignal Synaptobrevin Amnionless
Other DBs
NCBI-GeneID: 106342021
NCBI-ProteinID: XP_013636254
UniProt: A0A0D3AFG2
LinkDB
Position
C1:complement(42268689..42271332)
AA seq 318 aa
MATRNRTLLFRKYRNSLRSVRAPMTEAKSGVGPVIEMASASLLHPKRSYAPVSTEDPGSS
SRGGAITVGLPPDWVDVSEEISVNIQRARTKVAELGKAHAKALMPTFGDGKEDQHQIESL
TQEITFLLRKSEKQLQKLSAAGPSEDSNVRKNVQRSLATDLQFLSMELRKKQSTYLKRLR
LQKEDGGDLEMNLNGSSSRAEDDDFDDILFSEHQMSKIRKSEAISVEREKEIQQVVESVN
ELAQIMKDLSALVIDQGTIVDRIDYNIQNVASTVEDGLKQLQKAERTQRSGGMVMCASVL
VILCFIMIVLLILKEIFL
NT seq 957 nt   +upstreamnt  +downstreamnt
atggcgacgaggaatcgcacgctcttgttccgcaagtacagaaactctctgaggagcgta
cgcgctccgatgacggaagcgaaatccggcgtaggtccggtgatcgagatggcgagcgcg
tctctgctgcatcccaaacggtcctacgctccagtgagtactgaagatccagggagttcg
agtagaggaggagcaataacagtgggattaccaccagattgggttgatgtctctgaggag
atttcagtgaatattcagcgtgccaggaccaaagtggctgaactggggaaggctcatgcg
aaagcattgatgcctacgtttggtgatggtaaagaagatcagcatcagatcgagtctttg
acgcaggagattactttcctgttgaggaaatctgagaagcagcttcagaagctatctgca
gctggaccttctgaagattcaaatgtcaggaaaaacgtgcagcgatctctggctactgat
ctccaattcctttctatggagctccgcaagaaacagtctacgtatctgaaacgattgaga
ctacaaaaagaggatggaggggacttagagatgaatctcaacggaagcagctctagagca
gaagatgatgacttcgatgatatattatttagtgagcatcagatgagcaagattagaaag
agcgaggcaatatctgtagagagggagaaagagattcagcaggttgttgaatccgtaaac
gagctggctcagataatgaaggatctttctgcgcttgtgatagaccagggcacgatagtt
gatcggatcgactataacatccagaacgttgctagtacagttgaagatggtctcaaacag
ctgcaaaaggcggaacgtacacagaggagtggaggtatggtgatgtgtgcgtctgttctt
gtcatcctctgcttcatcatgatagttctcttaatcctcaaggagattttcttgtga

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