Brassica oleracea (wild cabbage): 106342021
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Entry
106342021 CDS
T04124
Name
(RefSeq) syntaxin-43-like
KO
K08489
syntaxin 16
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
106342021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
boe04131
]
106342021
Membrane trafficking [BR:
boe04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
106342021
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GFIT
Motif
Pfam:
SNARE
Syntaxin_2
Prominin
FlxA
MCPsignal
Synaptobrevin
Amnionless
Motif
Other DBs
NCBI-GeneID:
106342021
NCBI-ProteinID:
XP_013636254
UniProt:
A0A0D3AFG2
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Position
C1:complement(42268689..42271332)
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AA seq
318 aa
AA seq
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MATRNRTLLFRKYRNSLRSVRAPMTEAKSGVGPVIEMASASLLHPKRSYAPVSTEDPGSS
SRGGAITVGLPPDWVDVSEEISVNIQRARTKVAELGKAHAKALMPTFGDGKEDQHQIESL
TQEITFLLRKSEKQLQKLSAAGPSEDSNVRKNVQRSLATDLQFLSMELRKKQSTYLKRLR
LQKEDGGDLEMNLNGSSSRAEDDDFDDILFSEHQMSKIRKSEAISVEREKEIQQVVESVN
ELAQIMKDLSALVIDQGTIVDRIDYNIQNVASTVEDGLKQLQKAERTQRSGGMVMCASVL
VILCFIMIVLLILKEIFL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaggaatcgcacgctcttgttccgcaagtacagaaactctctgaggagcgta
cgcgctccgatgacggaagcgaaatccggcgtaggtccggtgatcgagatggcgagcgcg
tctctgctgcatcccaaacggtcctacgctccagtgagtactgaagatccagggagttcg
agtagaggaggagcaataacagtgggattaccaccagattgggttgatgtctctgaggag
atttcagtgaatattcagcgtgccaggaccaaagtggctgaactggggaaggctcatgcg
aaagcattgatgcctacgtttggtgatggtaaagaagatcagcatcagatcgagtctttg
acgcaggagattactttcctgttgaggaaatctgagaagcagcttcagaagctatctgca
gctggaccttctgaagattcaaatgtcaggaaaaacgtgcagcgatctctggctactgat
ctccaattcctttctatggagctccgcaagaaacagtctacgtatctgaaacgattgaga
ctacaaaaagaggatggaggggacttagagatgaatctcaacggaagcagctctagagca
gaagatgatgacttcgatgatatattatttagtgagcatcagatgagcaagattagaaag
agcgaggcaatatctgtagagagggagaaagagattcagcaggttgttgaatccgtaaac
gagctggctcagataatgaaggatctttctgcgcttgtgatagaccagggcacgatagtt
gatcggatcgactataacatccagaacgttgctagtacagttgaagatggtctcaaacag
ctgcaaaaggcggaacgtacacagaggagtggaggtatggtgatgtgtgcgtctgttctt
gtcatcctctgcttcatcatgatagttctcttaatcctcaaggagattttcttgtga
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