KEGG   Brassica oleracea (wild cabbage): 106342028
Entry
106342028         CDS       T04124                                 
Name
(RefSeq) RNA polymerase sigma factor sigC
  KO
K03093  RNA polymerase sigma-I factor
Organism
boe  Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:boe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:boe03021]
    106342028
Transcription machinery [BR:boe03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     106342028
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3
Other DBs
NCBI-GeneID: 106342028
NCBI-ProteinID: XP_013636259
LinkDB
Position
C4:31442943..31445689
AA seq 562 aa
MASFNSFPIPKQIVRSSSSSASRPRILVRSSMASSNSMLVFVPPHPLIKHWLSLLRCGQT
PPLPFFVRIASRWSFLSSLKEDTRFHRRDHPLKACGCASATAENVYVKLKDPKENIGVGV
VGEQMSSSSSEKANLSRSMLQYNLLGKNLLALEQTFVALESLRMERDIMLQMRKLGAAEL
FNTCLSRSRASSTTSCLPDTGTPELVDTTEEQQTFVPSTRKLRKKARRSSLMTGNDDQGS
RTTWEGIDVPRVRKPSKYRKKRERISRNEAEMSQGVKIVADMERIRTKLEEESGKVASMS
CWAEAAGMNEKLLMRNLHFGWYCRDELVKCTRSLVLFLARNYRGLGIAHEDLIQAGYVGV
LQGAERFDHTRGYKFSTYVQYWIRKSMSMMVSRHARGVHIPASIIRTMSQIQKARKTLKT
SQGIKYPADEEISKLTGYSLKKIRAANQCLKVVGSIDKKVGDCFTTKFLEFTPDTTMESP
EEAVMRQSARREVHNLIEGLEAREKQVMVLRYGLQDYRPKSLEEIGKLLRVSKEGIRKIE
RRAMAKLRDQPKADNLRYYLNQ
NT seq 1689 nt   +upstreamnt  +downstreamnt
atggcgtccttcaattcgttcccaattcccaaacagatcgttcgttcttcttcttcgtct
gcctctcggccacgtatcttggtgcgatcgagtatggcctcaagcaatagtatgctggtc
tttgtacctccgcatcctttgatcaaacattggctctctctcctgagatgcggccaaact
cctcctctccccttcttcgttagaattgcatcgaggtggtcgttcctttcctcactcaaa
gaggataccagatttcaccggagagatcatcctctaaaagcttgtggctgtgcttctgcc
actgctgaaaacgtctatgtaaagctcaaagatccaaaggaaaatattggcgtgggtgtc
gttggagaacaaatgtcttcttcttcttcagagaaagccaatttgtctcgtagcatgttg
caatacaacttactagggaagaaccttttagcactagagcaaacttttgtcgccttggag
tctttaagaatggaaagagatattatgttgcaaatgaggaagttgggggctgctgagtta
ttcaatacctgcctatccaggtcccgagcttcgtcaaccacttcatgcttacctgacaca
ggaacacctgagttggtggatactacagaagaacagcaaacctttgtgccttcaacaagg
aaactgagaaagaaagcaagacggtcgagtttgatgactgggaatgatgatcagggttca
agaaccacttgggagggtattgatgtccctagagtgagaaaaccatcaaaatatagaaag
aaaagagagaggatttctagaaacgaggctgagatgtcacaaggagtcaagatagtggcg
gacatggagaggatcagaacgaaactggaagaggaaagtggcaaggtagcgagtatgagt
tgttgggctgaagcagcagggatgaacgagaaacttctcatgcgcaatctgcatttcggt
tggtactgtagagatgaactggtgaaatgcacccggtctttggttctcttcctcgccaga
aactatcgtggactcgggatcgcccacgaagatttgattcaggcagggtatgtgggagtg
ttgcaaggagcagagaggtttgatcacacaaggggttacaagttttcgacatatgtgcag
tattggataagaaaatcgatgtccatgatggtgtcacggcatgcaagaggcgtccatatt
cctgcgtcaataatccgaactatgagtcagatacagaaggctcgcaagacgttgaaaacg
agccaggggataaagtatccggctgatgaggagatttcgaaactaacaggctactcctta
aagaagattagagcagctaaccaatgcctaaaagtggttggttcaatcgacaagaaagtt
ggggattgctttaccacaaagttcttggagtttacaccagacacgacgatggagagtcca
gaggaggctgtgatgaggcagagcgcaaggagagaggtacataatctaatagaagggcta
gaggctagagagaagcaagtgatggttctacgttatggtcttcaagactacaggcccaag
tccttggaagagattgggaagctgcttagggttagcaaagaagggattcggaagatcgaa
cggagagcgatggctaaactcagagaccaacccaaagccgacaacctcagatattatttg
aaccagtga

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