Brassica oleracea (wild cabbage): 106342033
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Entry
106342033 CDS
T04124
Name
(RefSeq) ubiquitin-activating enzyme E1 1-like
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106342033
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106342033
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106342033
Enzymes [BR:
boe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
106342033
Ubiquitin system [BR:
boe04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
106342033
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106342033
Exosomal proteins of other body fluids (saliva and urine)
106342033
Exosomal proteins of colorectal cancer cells
106342033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_FCCH
E1_4HB
E1_UFD
Gas_vesicle_C
Synaptonemal_3
Motif
Other DBs
NCBI-GeneID:
106342033
NCBI-ProteinID:
XP_013636264
UniProt:
A0A0D3C300
LinkDB
All DBs
Position
C4:complement(45574075..45578338)
Genome browser
AA seq
1053 aa
AA seq
DB search
MLESVAASSPIKKRRIDTTGDNSTISASGSVVQHMAFGNNSNRPEIDEDLHSRQLAVYGR
ETMRRLFASNVLVSGMHGLGAEIAKNLILAGVKSVTLHDERVVELWDLSSNFVFSEDDVG
KNRADASVNKLQDLNNAVVVSSLTTCLTKEHLSPFQVVVFSDISLEKAIEFDDYCHSHQP
PIAFVKADVRGLFGSVFCDFGPEFAVLDVDGEEPHTGIIASISNESQAFISCVDDERLEF
EDGDLVVFSEVEGMTELNDGKPRKIKSTRPYSFTLEEDTTGYGTYVKGGIVTQVKQPKLL
NFKPLREALTDPGDFLFSDFSKFDRPPLLHLAFQALDRFASEAGRLPVAGSEEDAQQLIS
IATSINTGQGDLKVENVDHKILRSFSFGAKAVLNPLAAMFGGIVGQEVVKACSGKFHPLF
QFFYFDSVESLPSEPLDSSDVAPRNSRYDAQISVFGAKLQKKLEDARVFTVGSGALGCEF
LKNMALMGVSCGNKGKLTVTDDDIIEKSNLSRQFLFRDWNIGQAKSTVAASAAAAINPKF
NIEALQNRVGAETENVFDDAFWENLTVVVNALDNVNARLYVDSRCLYFQKPLLESGTLGA
KCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPAEV
NAYLSSPVEYTNSMMSAGDAQARETLERIVECLEKEKCENFQDCLNWARLRFEDYFVNRV
KQLIYTFPEDAATSTGAPFWSAPKRFPRPLQYSSSDPSLLNFITATAILRAETFGIPVPE
WTKNPKEAAEAVDSVIVPDFEPRKDAKIVTDEKATSLTTASVDDATVINDLIAKLERCRH
NLSPDFRMKPVQFEKDDDTNYHMDVISGLANMRARNYSIPEVDKLKAKFIAGRIIPAIAT
STAMATGLVCLELYKVLDGGHKVEAYRNTFANLALPLFSMAEPVPPKVVKHRDMAWTVWD
RWVLKGNPTLREVLQWLEDKGLNAYSISCGSCLLFNSMFPRHKERMDKKVVDLARDIAKV
ELPPYRHHLDVVVACEDQDDNDVDIPLVSIYFR
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaatcagttgctgcatcgtcgccgatcaagaaacgccgtatcgataccactggt
gataactctacgatctcagcttccggcagcgtcgtccagcacatggctttcggtaataac
tcgaaccgtccggagatcgacgaagatctgcacagcaggcagctcgccgtgtacgggcgc
gagacgatgaggcgtctcttcgcttcgaacgttctcgtctcggggatgcacggccttggc
gctgagattgcaaagaatctgattcttgctggtgtgaagtctgtgacgctgcatgatgag
agagtggtggagctatgggacttgtctagcaactttgttttctctgaggatgatgttggc
aagaatagggccgatgcttctgttaacaagttgcaggatcttaacaatgctgtggttgtt
tctagcttgaccacttgcttaaccaaagagcatctttctcctttccaggttgttgtgttc
tctgacataagcttggaaaaagcaattgagtttgatgactattgccacagccaccagcct
cctatagcttttgtcaaggctgacgtcaggggtctttttggctccgtgttttgtgatttt
ggccctgaatttgcagttctcgatgttgatggggaggagccacacacaggcattatcgcc
tctatctctaatgagagccaggcctttatctcctgtgttgacgatgagagacttgaattc
gaagatggcgaccttgtagttttctctgaagttgaaggtatgacggagctcaatgatggg
aaaccgaggaagattaaaagcacacggccttattcattcaccctcgaggaggacaccaca
ggctacggaacgtatgtgaagggtgggattgtcactcaggtgaaacagccgaagttgctg
aatttcaaacccttgagggaagcgcttacggatccaggggattttctgtttagtgatttc
tccaagttcgatcggcctccgctccttcatttagcgttccaggcacttgaccggtttgct
tctgaagctggcaggctccctgttgctggctcggaagaggacgctcagcagcttatatcc
atcgccacgtccatcaatactggtcagggtgatttgaaggtggagaatgtcgaccataag
attctacgaagcttctcctttggagccaaggctgttcttaatcccctggctgcaatgttt
ggcggtattgttggacaggaggttgtcaaagcttgctctggaaaattccatcccctcttt
cagtttttctactttgattcagtggagtcactcccctctgaacctctggattctagtgac
gttgcaccgaggaacagccggtacgatgcccaaatatctgtatttggggccaagttacag
aagaaactcgaagatgctagagttttcacagtagggtctggtgctctcggctgcgagttc
ctgaaaaatatggctctgatgggggtttcatgtgggaacaaagggaagttaacagtgacg
gatgatgatataattgagaagagcaacctcagtcgtcagtttctattccgcgattggaac
attggacaggctaaatccacagttgctgcttccgctgctgcagctataaaccccaagttc
aacattgaggccctgcagaaccgtgtgggcgctgagactgagaatgtatttgacgatgcc
ttctgggagaacttgactgttgtcgtcaatgcgttagataatgtcaatgcgaggctctac
gttgattcgaggtgcttgtatttccagaagcctctccttgagtctgggactcttggtgca
aagtgcaacacacagatggtcatcccacatctgactgaaaattacggcgcctcaagggac
ccgccagagaaacaggcccccatgtgtacggtgcactcgttcccgcataacatcgatcac
tgtttaacttgggctcgctctgagttcgagggtctgcttgagaaaactcccgctgaagtg
aatgcatatctctctagcccggttgagtacactaactcaatgatgagtgctggcgatgct
caggcgagggagacgttggagaggatcgttgagtgccttgaaaaggagaagtgtgagaac
ttccaggactgcttaaactgggctcgactcaggtttgaggattactttgtgaaccgtgtg
aagcaattgatatacacatttcctgaagatgctgcgacaagtacgggagctccattctgg
tctgctccaaaaagattcccacgtccgctccagtactcctcctctgacccaagcctcctt
aacttcatcacggcgactgctattttaagagcagagacatttgggatccctgtgcctgag
tggaccaaaaacccaaaggaagcagctgaagctgtagacagtgtgatagtcccagacttt
gagccaaggaaagatgcaaagattgtgacggatgagaaagccaccagtttaaccactgct
tcggtggatgacgctacagtcatcaacgacctcattgctaagcttgagcggtgtaggcat
aacttgtccccagatttcaggatgaaaccagttcagttcgaaaaggatgatgatacaaac
taccacatggacgtgatatcgggtcttgccaacatgagggccaggaactacagcatacct
gaagtcgacaagctgaaagcaaagttcattgcagggagaatcatcccagccattgcgacc
tcaacagccatggctactggtcttgtctgcctcgaactttacaaggtccttgatggagga
cacaaagtggaagcctacaggaacacatttgccaacctggcgctgccactcttctccatg
gccgaaccggttccgccgaaggtggtgaagcaccgcgacatggcttggaccgtttgggac
agatgggttctgaaaggaaacccaacactgcgtgaggtgttgcagtggctggaggacaaa
gggcttaacgcttacagcatctcctgcggaagctgtctcctgttcaacagtatgttcccg
aggcacaaggagaggatggacaagaaagtggtggacctcgctagggatattgctaaagtg
gagttgccgccttaccgtcaccatcttgatgtagtggtggcttgtgaggatcaagatgac
aatgacgtcgatattcctctcgtctctatctatttcaggtga
DBGET
integrated database retrieval system
