Brassica oleracea (wild cabbage): 106342236
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Entry
106342236 CDS
T04124
Name
(RefSeq) protein argonaute 5
KO
K11593
eukaryotic translation initiation factor 2C
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106342236
03036 Chromosome and associated proteins [BR:
boe03036
]
106342236
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106342236
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106342236
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
106342236
microRNA pathway
RISC loading complex
106342236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
106342236
NCBI-ProteinID:
XP_013636559
UniProt:
A0A0D3BUB9
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All DBs
Position
C4:complement(15751800..15756918)
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AA seq
967 aa
AA seq
DB search
MSSRGGYGGAGRGGGGGRRSDQSSGPAAWPALQSSGVRGGRGRGNAGRGNAAPVASSSSS
PPSGAVSGVIGAGDVASSSSVREKPKASGSSDSGSSLGQELAEKVQITTAPPSSSKAVTF
PVRPGFGKLGKKVTIRANHFLVQVADRDLYHYDVSITPEVISKKVNRDVMTTLVKTYGES
HMAKKIPAYDGRKSLYTAGPLPFESKEFVVDLNGKKPTASSKRDRKFKVAIKLASRPDLH
QLQEFLRRKQRDAPYETIQVLDVVFRDLPSQKYVSVGRSFFDPSLGRRGELADGVEYWSG
YFQSLRLTQMGLSLNIDVSARSFYEPILVTEFIGKYLNLRDFSRPLRDSDRVKVKKALKS
LKVELAQFDFARSTKVSGISSCPISELRFTLEDNTQKTVVQYFAEKFNYRVKYPALPAIQ
SGSDSRPAYFPMEFCRIAEGQRYTKKLNERQVTALLRATCQRPEIRENSIKGMVKNNKYN
EIDLVRKEFGMSVTDQLATVEARVLPPPLLKYHESGREKMVNPRLGQWNMIDKKMINGAI
VASWTCVSFSTRIDRNLPQEFCKQLIDMCVSKGMQFNPQPAIPFISCQPQRIEEALCDIH
KRAPGLQMLIVILPDVTGSYGKIKRICETELGIVSQCCQPNQVRKLNKQYMENVALKINV
KTGGRNTVLDDAIRRRIPLISDRPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPEITKY
RGLVSAQTHREEIIEDLYKLVQDPQRGPVHSGMIREHLIAFRRATGQKPQRIIFYRDGVS
EGQFSQVLLHEMIAIRKACASLEERYLPPVTFVVVQKRHHTRLFPAQHGNRETTDKSGNI
QPGTVVDTKICHPTEFDFYLNSHAGIQGTSRPAHYHVLVDENGFTADALQMLTNNLCYTF
ARCTRSVSIVPPAYYAHLAAFRARYYMESENSDGGSSRSRNTTASTSAVVSLLPATKDNV
KDVMFYC
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcgtggtggatacggcggcgctggtcgcggcggtggtggaggacgtcgatct
gaccagtcctctggtcccgctgcgtggccggcactgcaaagctccggcgttcgcggcggg
agaggtcgcggtaacgccggacggggaaacgccgctcccgtcgcttcgagctcttcgtct
cctccgtcgggtgctgtttccggcgtcatcggagccggtgacgtcgcttcgtcgtcgtcc
gtacgtgagaaacccaaggcctctgggtcttcggattctggttcgtctctcggtcaggag
ttagcggagaaagtccagatcacgacggctcctccgtcgtcctcgaaggcggtgacgttt
ccggtccggccagggtttggtaaattggggaagaaagtgacgattcgcgcgaatcacttc
ctcgtccaagttgcggatagggatctgtatcactacgatgtttcaatcactccggaggtt
atttcgaagaaggtgaacagggacgtgatgacaacgttggtgaagacatacggagaatca
cacatggcgaagaagattcctgcgtatgatggaaggaagagtctctacactgctgggcct
ctgccttttgagtctaaagagtttgttgtggatctgaatggcaaaaaacccactgcttca
tccaagagggacaggaagttcaaagttgctataaagctggcctcaaggcctgatcttcat
cagttgcaggagtttctccgtcggaaacagagagatgctccatacgagaccatccaagtt
ttggatgttgtattcagggatctgccatcccaaaagtatgtttccgttgggaggtctttc
ttcgacccgagtttgggaaggaggggtgagcttgctgatggtgttgagtactggagcggg
tatttccaaagtctcagactcactcagatgggactgtctcttaacattgatgtgtctgct
agatctttctatgaacctatccttgtcactgaattcatcggcaagtacctgaatctgagg
gattttagcaggccactgagggactcggatcgtgtcaaggtgaagaaagcattgaagagc
ttaaaagttgaattggcccagtttgactttgcaagaagtaccaaggtcagtgggatttcc
agctgtcccatcagcgagctaaggttcacgttagaggacaacacccaaaaaactgttgtg
cagtactttgctgagaagtttaattacagggtgaaatacccggctctacctgctatccaa
tcagggagtgactcaaggcctgcatacttcccaatggaattttgccggatagctgaaggc
cagagatacaccaaaaagctcaatgagaggcaggtgactgcgttgctgagagctacctgc
caaaggcctgaaattagagagaattcgatcaaagggatggtcaagaataataagtataac
gagattgatcttgtgaggaaggagtttggaatgtcagtgaccgatcagctagccacagtt
gaggctcgtgtcctacctccacctctgttgaaataccatgaaagcggcagagaaaaaatg
gtaaatccaaggctaggacagtggaacatgattgacaagaaaatgattaatggagcaata
gttgcatcttggacgtgcgtgagcttctctactcggattgaccggaatttaccacaggag
ttttgcaagcaattgattgacatgtgcgtcagcaaaggaatgcaattcaacccacaacct
gctattccgttcatctcttgccagcctcaaagaattgaggaagcactttgtgatatccac
aaaagggcacctggtcttcagatgttgattgtaatcttgcctgatgtcactgggtcttac
ggaaagatcaaaaggatatgtgaaacagagctagggatagtatcccagtgttgtcaacca
aaccaagttcgtaaactcaacaagcagtacatggaaaatgtggcattgaagattaatgtc
aagactgggggacggaacacagttcttgatgatgccattagaagaagaattcctctgatt
agtgatcgtccaaccataatctttggtgctgacgtgactcaccctcaacctggagaggac
tcgagtccttctattgctgcggttgtggcatccatggattggcctgagataaccaagtat
cgtgggctggtttctgcccaaactcatagggaagaaatcatcgaggacttgtataagctg
gtgcaggatcctcagcgagggccagtccactcgggtatgataagggaacatctcatcgca
ttcaggagggctacaggtcaaaaacctcagaggatcatattctatcgcgatggtgtgagt
gaaggacagtttagccaagtgctgttgcatgagatgattgctatacgtaaggcatgtgcc
tctctcgaagagcgttatcttccgcctgttacctttgtcgtcgtccagaaaagacaccac
acacgtttgtttcctgctcaacacgggaaccgtgagacgactgataagagtgggaatatt
cagccaggtaccgtcgtcgataccaaaatctgtcatcccacggagttcgacttctatttg
aacagtcacgctggcattcagggaacaagcaggcctgcacattaccacgtgcttgtggac
gagaacggtttcacagctgatgcgttacaaatgctcaccaacaacctctgctacacgttt
gcgagatgcacgagatctgtctcaattgtgccaccggcttactatgcacatttggctgca
ttcagggctcgttactacatggaaagtgagaactctgatggaggttcaagcaggagcagg
aacacaaccgcaagcacgagtgctgttgtctcgcttcttccagcaaccaaggataacgtc
aaggacgttatgttctactgctga
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