Brassica oleracea (wild cabbage): 106342247
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Entry
106342247 CDS
T04124
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boe03036
]
106342247
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
boe00535
]
106342247
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
106342247
Meiosis-specific proteins
Cohesin complex and associated proteins
106342247
Proteoglycans [BR:
boe00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
106342247
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
ATG14
TMF_DNA_bd
AAA_29
Microp_apicomplexa_7
Motif
Other DBs
NCBI-GeneID:
106342247
NCBI-ProteinID:
XP_013636570
UniProt:
A0A0D3C2A7
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Position
C4:complement(43745021..43752806)
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AA seq
1204 aa
AA seq
DB search
MYIKLVIIEGFKSYKEQVATEIFSPKVNCVVGANGSGKSNFFHAIRFVLSDIFQNLRNED
RHALLHEGAGHQVASAFVEIVFDNSDNRIPVDKEEIRLRRTIGLKKDEYFLDGKHITKNE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDPERLDLLKEIGGTRVYEERRRESLKIMQ
DTGNKRKQIIQVVQYLDERLRELDEEKEELRKYQQLDKQRKSLEYTIYDKELHETREKLE
QVEVARTKASEESTKMYDRVEKAQDESRSLDESLKGLTKELQTLNKEKETVEARRTEAIK
KKTKLELDENDFKERMAGNIQSKNDALEQLSMVEREMQDSLKELEAINPLYESQVDKEKQ
TTKRIMELEKKLSILYQKQGRSTQFSNKAARDKWLRKEIEDLKRVLDLNLNQEQKLQDEI
FRLNTDLTERDGHIKKCEAEIGELESHISKSHEQFNIKKRERDEEQRKRKEKWGEESELS
SELEKLKTELERAKKNLDHATPGDVRRGLSSIKRICSEYKINGVFGPLVELVDCEEKFFT
AVEVTAGNSLFHVVVENDDISTQIIKHLNSRKGGRVTFIPLNRVKAPHVNYPQSTDAIPL
LRRLKFDSRFAPALGQVFGRTVVCRDLNVATRVAKNDGLDCITLEGDQVSRKGGMTGGFY
DHRRSKLRFMNTIIQNTKSINTKEKVLEDVRRQLQVIDQQITQLVTEQQRLEADWTHSKL
QVEQLKQEIANANRQKQAIRKALENKEKSLDDIRTQIDQLRSSMAMKEAEMGTELVDHLT
PEEREQLSRLNPEIKDLKEKLIAYKTDRIERETRKAELETNLSTNLKRRINELQATIASI
EDDSLPSSAGLKTQELDDARLFVEEITNELESLCRSIDEKTKQVKKFKDEKAKLKALQDD
CEMTVQDANKKLEELFSLRNTLLAKQEEYTKKIRGLGPLSSDAFDTYKRKNIKELQKMLH
RCTEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELDAGDEKIKELITVLDQRKDESIE
RTFKGVARNFREVFSKLVQGGHGHLVMTKKKDRDHDDEDDEDDGGREADAEGRVEKYLGV
KVKVSFTGQGETQSMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRGLADDSVSTQFITTTFRPELVKVADKIYGVFHKNRVSIVQVISKDQALDFIEKDQ
SHDT
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtatattaagctggttataatcgaaggattcaagagttacaaagagcaagtcgctact
gagattttcagccccaaagttaactgcgttgttggggcaaatggttctgggaaaagcaac
ttcttccatgcaattcgtttcgtgttgagtgacatcttccaaaatctgcggaatgaagat
aggcacgcactactccatgaaggtgctggtcatcaggttgcttctgcgttcgtggagatc
gtctttgataactccgacaaccgcatcccggttgataaggaagaaattcgcttgcgccga
actattggtctgaagaaggatgagtatttcctggacgggaaacacattacaaaaaatgaa
gttatgaatttacttgagagtgctgggttttctcgttctaatccgtactatgttgttcaa
caaggaaagatagcctcattgacactgatgaaagacccagaacggctggatctgctaaaa
gagattggtggtacccgtgtttatgaggagaggcgccgtgagagcttaaagatcatgcag
gatacagggaataaacggaagcagataatccaagttgtgcaatacctggatgaaagacta
agggaattggacgaagagaaagaagaactcagaaaataccaacaacttgataagcagaga
aaatcactggaatacaccatttacgacaaagagcttcacgaaactagggagaaactggaa
caggtagaagttgcaagaactaaggcatctgaagagtctacaaaaatgtatgatagagtt
gagaaggcccaggacgagtccagaagcttagatgagtcgctgaaaggactgacaaaggag
cttcagacattgaacaaggagaaagaaactgttgaagcacgaagaactgaagctataaag
aagaagacaaaactggagcttgatgagaatgactttaaggaacggatggctggaaatatc
caatctaagaatgatgcccttgagcaacttagtatggtggaaagagaaatgcaggattct
ttgaaggaactagaggcgattaatcctttgtatgaaagtcaagttgacaaggagaagcag
acgacaaaaagaatcatggagctggagaaaaagcttagtattctttatcagaaacaaggc
cgttcaactcagttttcaaataaggctgcacgagacaaatggctccgcaaggagattgag
gatcttaagcgtgttttagacttaaatctgaatcaagagcaaaaacttcaggatgaaatt
tttcgcctcaatactgatttgacagagcgtgatggacacatcaagaaatgcgaagctgaa
attggtgaactggaatctcacatttctaagtcccatgaacaatttaatattaaaaagagg
gagagagatgaagaacagagaaaaagaaaggaaaaatggggagaagaaagtgaactatct
tctgaacttgagaagttgaaaacggaacttgaaagggcaaagaaaaaccttgatcatgcc
actccaggagatgttaggcgagggctgagctctattaaacggatttgctctgagtataag
atcaatggagtttttggcccacttgttgagttggttgattgcgaggaaaagtttttcact
gcagttgaagtcactgctggaaacagcttatttcacgtggtagttgagaacgatgatatt
tcaacccaaataattaaacacctgaattctcgaaagggtggacgggtaaccttcatacct
ctgaatcgagttaaggctcctcacgtaaattatccacaaagtactgatgcaataccacta
ctgagaagattgaagttcgattctagatttgcaccagcattgggccaggtttttggtaga
acagtagtatgtcgtgatctgaatgtggcaacaagagttgctaagaacgatggcttagat
tgcataactctggaaggtgaccaggttagcagaaagggtggcatgaccggtggattttat
gaccacaggcggtcaaaattgagattcatgaataccataatacaaaatacaaagtctata
aatacgaaggagaaggtgttggaggatgttagaagacagctacaagtgatagatcagcag
atcacacagcttgttactgagcagcagaggcttgaagcagactggacgcatagcaaacta
caggtggagcaactgaagcaagagatagctaatgcgaataggcagaaacaagctatacgt
aaagcccttgaaaataaggagaaatcactagatgatattagaacacaaattgatcaacta
agatctagcatggccatgaaggaagctgaaatgggaacagaacttgtggatcatctaacc
ccagaggaaagggagcaattgtcacgactaaaccccgaaattaaggatcttaaggagaaa
cttattgcatataagacagatcgcattgagagggagacaaggaaagcagagttggagact
aacttatctaccaacttaaagaggagaataaatgagttacaggctacaatagcttccatc
gaggatgatagtttgcctagttcagctggcttaaaaacacaagaactcgatgatgcaaga
ttgtttgttgaagagatcacaaacgagctcgaaagtctctgtcgaagcattgatgagaag
actaagcaggtcaagaaatttaaagatgagaaagcgaagttaaaggcattgcaagatgac
tgtgagatgacagtgcaagatgcaaataaaaaattggaggaactattcagccttcgcaac
acactccttgcgaagcaagaagagtatacaaagaaaattaggggattgggtccattgtca
tctgacgcttttgacacgtacaaacggaaaaatatcaaggagctgcagaaaatgctacac
cgatgcactgaacaactgcaacaattcagccatgtaaacaagaaagcgcttgatcaatat
gtaaatttcacagaacaacgagaagaacttcagaaacggcaagcagagcttgatgcagga
gatgagaaaattaaagaactgataacagttctggatcagcggaaagatgaatctatagaa
cgtactttcaaaggggttgcacgcaacttccgggaggtattctctaagcttgtgcaaggt
gggcatggtcaccttgtcatgacgaagaaaaaggaccgcgatcacgatgatgaagatgat
gaggatgatggaggtcgtgaggctgatgcagagggaagggttgagaaataccttggcgta
aaagtgaaggtgtcgtttactggtcaaggggagacacagtcaatgaaacaattgtcggga
ggccaaaagaccgtcgttgctctcgcattaatctttgccatccagagatgcgatcctgca
ccattctatctttttgatgagattgatgccgcactcgatcctcagtatcgaactgctgtg
ggcaacatgattcgtggtttagctgatgacagtgtaagcacgcagttcattaccacaact
ttccgtcccgagcttgtgaaggttgcggataagatatatggagtatttcataagaacaga
gtgagtattgtgcaagttatatcaaaggatcaggcgttggacttcatcgagaaagatcag
tcccatgatacttga
DBGET
integrated database retrieval system