Brassica oleracea (wild cabbage): 106342335
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Entry
106342335 CDS
T04124
Name
(RefSeq) protein argonaute 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106342335
03036 Chromosome and associated proteins [BR:
boe03036
]
106342335
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
106342335
Chromosome and associated proteins [BR:
boe03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
106342335
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
106342335
microRNA pathway
RISC loading complex
106342335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
106342335
NCBI-ProteinID:
XP_013636695
UniProt:
A0A0D3BUL0
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All DBs
Position
C4:complement(16779164..16784903)
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AA seq
923 aa
AA seq
DB search
MDSSTGNGADLESANGSGVTDALPPPPPVIPPNVEPVRVKTEAAEKKNLRVPMARPGFGS
KGQKIQLLTNHFKVNVANLQGHFYHYSVALFYDDGRPVEQKGIGRKILDKVHQTYHSDLD
GKEFAYDGEKTLFTFGALPSNKMDFSVVLEEVSSTRTNGNASPNNGNEEPSDGDRKRLRR
PNRSKSFRVEISYAAKIPLQALANAMRGQESENSQEAIRVLDIILRQHAARQGCLLVRQS
FFHNDPSNCEPVGGNILGCRGFHSSFRTTQGGMSLNMDVTTTMIIKPGPLVDFVIANQGV
NDPFNVDWSKAKRTLKNLRIKVSPSNQEYRITGMSDKPCREQMFEYRPRNAPKNENRESE
TVEISVYDYFLRERNLELQYSADLPCINVGKPKRPTYIPLEHCTLIPLQRYTKALNTFQR
SALVEKSRQKPQERMNVLSKALKVSNYDTEPLLRSCGISISSNFTQVEGRVLQAPKLKMG
RGDELFPRNGRWNFNNKQFVEPTKIDKWAVANFSARCNVRQLVDDLMRIGGMKGVEIAPP
FDVFEEGHQFRRAPPLIRVEKMFEEIQSKLPGAPQFILCLLPERKNCDIYGPWKKKNLTE
YGIVTQCMAPVRQPNDQYLTNCLLKINAKLGGLNSLLSVERTPAFTVVSKVPTIILGMDV
SHGSPGQSDVPSIAAVVSSRQWPLISKYRASVRTQPSKAEMIESLVKKNGTEDDGIIKEL
LVDFYASSGKRKPENIIIFRDGVSESQFNQVLNIELDQIIEACKLLDENWNPKFLLLVAQ
KNHHTKFFQTSSPDNVPPGTIIDSKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIHF
SPDELQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGVTA
PGPVSVAQLPKLKDNVANSMFFC
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggattcttctactggtaatggggctgaccttgaatcagcaaatgggagtggggttact
gatgcattgccacctcctccgccagtcatacctcccaatgttgagccagtgcgggttaaa
accgaagcggctgagaagaaaaacctgagagtccctatggctcgtcctgggtttggatca
aagggtcagaagatacaactgttgactaatcatttcaaagtcaacgtcgctaatcttcaa
ggacatttctaccactacagtgtggcgctcttctatgatgatggccgtcctgttgaacaa
aaaggtattggaagaaaaatcctagacaaggtccatcagacttaccattctgatcttgat
ggcaaagagtttgcctacgatggagaaaagaccttgtttacgtttggagctttgcctagc
aacaagatggacttctctgtggttcttgaggaagtatcttcaaccaggactaatggaaat
gcaagccccaataatggtaacgaagagccaagtgatggtgataggaagagactgcgtcgt
cctaaccgctccaaaagctttagagtcgagatcagctatgcagccaagatacctctacaa
gctcttgctaatgctatgcgcggccaggaatctgagaactcacaggaggctataagggtt
ttggatatcatcttacgtcaacatgctgctagacaaggctgcctgcttgtgaggcaatct
tttttccacaatgacccgagtaactgcgaaccagttggtggtaacatcctgggatgtaga
ggattccactcgagtttccgaaccacgcagggaggaatgtcccttaacatggatgttaca
accacaatgataatcaagcctggtccgcttgttgattttgttattgctaaccaaggtgta
aatgatccgtttaatgttgactggtctaaggctaaaaggacgctcaaaaaccttaggatt
aaagtcagcccctcaaaccaggagtacaggatcactggaatgagtgacaagccttgcagg
gaacagatgtttgaatataggccaaggaacgcaccgaaaaatgagaacagagagtctgaa
actgttgaaatatcggtgtatgactacttcctcagagaacggaacctggagctgcagtat
tctgcggatttgccgtgcatcaatgttgggaaaccaaagcgtcccacctatattcccctc
gagcactgcaccttaattcccctacagaggtacacaaaagcgctcaacactttccaaaga
tctgcccttgtcgagaaatctagacagaagccccaggagaggatgaacgttctgtccaaa
gcactgaaagtgagcaactatgacactgaacctctcctgcgttcctgtggcatatctatc
agctccaactttactcaagtggagggacgtgtcctccaagctcctaagctgaaaatggga
cgtggagatgaactgtttccgcgaaatggtcgctggaatttcaacaacaagcaatttgtt
gagccaaccaagattgacaaatgggctgttgcgaatttctctgctcgctgcaatgtacgt
cagctggttgatgatttaatgcgaatcggtggaatgaaaggagttgaaatcgctcctcct
tttgatgtatttgaggagggtcatcagtttcgccgtgctcctcctcttattcgtgtggag
aagatgtttgaagagatccagtctaagctccctggtgctccacagtttattctttgcctc
ctccccgagaggaagaactgtgacatttatggcccatggaagaagaaaaacctaaccgaa
tacggcattgttactcaatgcatggctccagtgaggcaacctaatgatcaatatcttaca
aactgtcttctgaagatcaacgcaaagctcggagggcttaattcactgttaagtgtggag
cgaacaccggccttcacggtggtttccaaggttccaaccatcatccttggaatggatgtc
tcacatggatctcctggacagtctgatgtcccgtccattgctgccgtggtgagttctagg
cagtggcctctaatctccaagtacagagcatctgttcgcactcagccttccaaggctgaa
atgattgagtcccttgtgaagaaaaatggaactgaagacgatggcattatcaaggagtta
ctggtagatttctatgccagctctggtaagagaaagcctgagaatatcattatcttcagg
gatggtgttagtgaatctcagttcaaccaggttctcaacattgaactcgaccagatcata
gaggcatgcaagcttctagatgagaactggaacccgaaattcctcttgctggtggctcag
aagaatcaccacaccaagtttttccagacgagctctcctgataacgttcccccagggaca
ataatcgacagcaaaatctgtcacccgaagaataatgatttctatctctgcgcgcacgct
ggaatgattggaacaactcgtcctacacattaccatgtcctgtatgatgagattcatttc
tcacctgatgaacttcaggagctcgtccactcactctcttacgtgtaccaaagaagcacg
actgccatttctgttgttgcaccgatctgctatgctcacttggcagctgctcagctagga
acgttcatgaagttcgaagatcagtctgagacgtcttcaagccatggtggcgtgacagct
ccaggaccagtctctgttgcgcagctcccaaaactcaaagacaacgttgccaactccatg
ttcttctgttag
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