Brassica oleracea (wild cabbage): 106342391
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Entry
106342391 CDS
T04124
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106342391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106342391
03110 Chaperones and folding catalysts [BR:
boe03110
]
106342391
03029 Mitochondrial biogenesis [BR:
boe03029
]
106342391
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
boe04147
]
106342391
Enzymes [BR:
boe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
106342391
Messenger RNA biogenesis [BR:
boe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
106342391
Chaperones and folding catalysts [BR:
boe03110
]
Heat shock proteins
HSP60 / Chaperonin
106342391
Mitochondrial biogenesis [BR:
boe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
106342391
Exosome [BR:
boe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
106342391
Exosomal proteins of other body fluids (saliva and urine)
106342391
Exosomal proteins of breast cancer cells
106342391
Exosomal proteins of colorectal cancer cells
106342391
Exosomal proteins of bladder cancer cells
106342391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
106342391
NCBI-ProteinID:
XP_013636755
LinkDB
All DBs
Position
C4:44204975..44208761
Genome browser
AA seq
585 aa
AA seq
DB search
MASANVLSSASVLCSSRQGKLSGGNQQKGQRVSYRKASSRFSVRANVKEISFDQSSRAAL
QAGIDKLADAVGLTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELPDAMENAGAALIREV
ASKTNDSAGDGTTTASVLAREIIKHGLLSVTSGANPVSLKRGIDKTVQALIEELEKRARP
VKGGSDIKAVATISAGNDELVGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDR
GYISPQFVTNPEKLLVEFENARVLITDQKITAIKDIIPILEKTTQLRAPLFIIAEDVTGE
ALATLVVNKLRSVLNVVAVKAPGFGERRKAMLQDIAILTGAEYQALDMGLLVENTTIDQL
GIARKVTISKDSTTLIADAASKDELQARISQLKKELSETDSVYDSEKLAERIAKLSGGVA
VIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGATLVHLSTVIPAIKEKLEDAD
ERLGADIVQKALVAPAALIAQNAGIEGEVVVEKIMFSEWEIGYNAMTDTYENLLEAGVID
PAKVTRCALQNAASVAGMVLTTQAIVVDKPKPKAPTAAPPQGLMV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcaaacgttctctcctccgcctccgtcctctgctcttcacgccagggaaag
ctcagtggaggaaaccagcagaaaggtcaaagagttagctacaggaaagcaagcagccgt
ttcagcgttagagctaatgtaaaagagatctctttcgaccagagctcaagagctgctctt
caagctggtattgacaagcttgctgatgccgttggtcttacccttggccctagagggaga
aatgttgtgttggatgagtttggaagtcccaaggtcgtgaatgatggagtcaccattgct
agggccattgagttacctgacgctatggagaatgctggtgcagcacttatccgtgaggtt
gctagtaagactaatgactcagctggtgacggcacaaccactgcctccgtccttgctcgg
gagataatcaaacacggcttactaagcgtcacttccggtgccaatccagtctcactcaag
agaggaatcgataagaccgttcaagctttgatcgaagagctcgagaagagggctagacct
gtcaaaggcggtagtgacatcaaagccgtggctacaatctctgctggaaatgatgagctt
gtgggaacaatgattgctgatgccattgataaagttggacctgatggtgttttgtccatt
gaatcttcttcctcctttgagactaccgtcgaagttgaagaaggaatggagattgataga
ggttacatctcaccacagtttgttacaaaccctgagaagctcctagtcgagttcgagaac
gcgcgcgtgctgatcaccgatcagaagatcactgcgatcaaagacatcatcccgatcctg
gagaaaaccactcagctccgagctccgttgttcatcatcgcggaggatgtcaccggcgag
gccctggcgaccctcgtcgtgaacaaactccgcagcgtgctcaacgtggtcgccgtcaag
gctccagggtttggtgaaagaagaaaagctatgcttcaggacattgccatcttgacgggg
gccgagtaccaggccctcgacatgggccttctggtggagaacacgaccatagatcagttg
gggatcgctaggaaagtcactattagcaaagactcgaccacgcttatagctgatgcggct
tccaaggacgagctgcaagctcgtatctcccagcttaagaaggagctgtcagagactgac
tccgtgtacgactcggagaagctcgccgagagaatcgccaagctctcaggcggtgttgcc
gttattaaagtcggagcggcgactgagactgagctcgaggaccgtaagcttcgtatcgag
gacgcgaagaacgctacatttgctgcaatcgaagaagggatagttcctggcggcggtgcc
acgctggtgcatctatcaactgtgattcctgctattaaggagaagcttgaggatgctgat
gagcgtttgggagccgacatagtacagaaggctttggtggcaccagctgcgcttattgca
cagaacgctggaatagaaggagaagttgttgtggagaagattatgttcagcgaatgggag
atagggtacaacgccatgactgatacatatgagaatctgttggaagctggagtgattgat
ccagctaaagtgacgagatgtgcgcttcagaacgctgcttcggttgcggggatggtgctg
accactcaggccattgttgtcgacaaaccgaaacctaaggctcctactgctgctcctcct
cagggtctcatggtgtaa
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