Brassica oleracea (wild cabbage): 106342407
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Entry
106342407 CDS
T04124
Name
(RefSeq) serine/arginine-rich splicing factor RS31
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106342407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
boe03041
]
106342407
Spliceosome [BR:
boe03041
]
Common components
Common spliceosomal components
SR proteins
106342407
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RNA_bind
RRM_5
Nup35_RRM_2
PHM7_cyt
RRM_fung
Motif
Other DBs
NCBI-GeneID:
106342407
NCBI-ProteinID:
XP_013636779
LinkDB
All DBs
Position
C4:899438..901557
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AA seq
246 aa
AA seq
DB search
MRPVFVGNFEYETRQSELERLFSKYGRVERVDMKSGYAFVYFEDERDAEDAIRGIDNIPF
GYEKRRLSVEWAKGERGKPHGKAASNQRPTKTLFVINFDPIHTKERDIERHFEPYAKVLN
VRIRRNFAFVQFATQEDATKALESTQNSKLMDRVVSIEYALRDDDERDDRYAASPRRRSP
SPVYRRRPSPDYGRPRSPEYDRYKGPDAYERRRSPDYGRRSPEYGGARSPGYDRYRSRSP
VYRGRG
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaggccggtgttcgtcgggaacttcgagtacgagactcgccaatcggagctggaacgg
ttgttcagcaagtacgggagagtggagcgcgttgacatgaagtctggttatgcttttgtg
tattttgaggatgagcgtgatgctgaggatgctatccgtgggattgacaatatccctttt
ggctatgagaaacgcaggctctctgtcgaatgggctaagggtgaacgtgggaagcctcat
ggaaaggcagcctcgaaccagaggcctacaaagacactatttgtcatcaacttcgaccct
atccacaccaaagagcgtgatatcgagaggcactttgaaccctatgctaaagttctcaac
gtccgcattaggcgcaatttcgcattcgttcaatttgcaactcaggaagatgcaaccaag
gcccttgaatctacacaaaacagcaagttaatggacagggttgtatccattgagtatgct
ttgagggatgatgatgaaagagatgatagatacgctgctagtccgagaaggagatcccct
agtccagtgtacaggaggcgtcccagtcctgattacggccgtcctcgcagtcctgagtat
gacaggtacaagggtccagatgcttacgaaaggcgtaggagcccagattatggccgtcgc
agtccggaatacggtggagctaggagccccggttatgacagatacagaagccggtctcct
gtatacagaggaagaggttga
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integrated database retrieval system
