Brassica oleracea (wild cabbage): 106342432
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Entry
106342432 CDS
T04124
Name
(RefSeq) tRNA (cytosine(34)-C(5))-methyltransferase-like
KO
K15334
multisite-specific tRNA:(cytosine-C5)-methyltransferase [EC:
2.1.1.202
]
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106342432
Enzymes [BR:
boe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.202 multisite-specific tRNA:(cytosine-C5)-methyltransferase
106342432
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
106342432
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GFIT
Motif
Pfam:
Methyltr_RsmB-F
Pre-PUA_NSUN2
PUA_NSUN2
FtsJ
Motif
Other DBs
NCBI-GeneID:
106342432
NCBI-ProteinID:
XP_013636815
UniProt:
A0A0D3C167
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Position
C4:complement(40475532..40479311)
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AA seq
780 aa
AA seq
DB search
MGRGRQRGRSQRKHFKESRENVWKRPKSDAPDKPTWEPFLTDNPNFEEYYKEQGIVKAEE
WDLFMEILRKPLPAAFRVNSNSQFCDEIISILENDFVKSLQAEAIEGGELEAIKPLPWYP
KNLAWHSNFSRKEIRKNKILERFHEFLKLENEVGNMTRQEAVSMVPPLFLDVHPDHFVLD
MCAAPGSKTFQLLEIIHGASEPGTLPNGMVVANDVDFQRSNLLIHQTKRMCTANLIVTNH
EGQQFPGCRLKGLSEDMPINQLSFDRVLCDVPCSGDGTLRKAPDIWRKWNSGMGNGLHSL
QVILAMRGLSLLKVGGKMIYSTCSMNPVEDEAVVAEILRRCGDSVELVDVSDKLPELIRR
PGLKTWKVRDKGGWFTSYKDVPQNRRGGVIVSMFPSGKNLKDSTETTQENENGGVQDECK
ETENSVVDAIPDEPVVEVSDLPLERCMRIVPHDQNTGAFFIAVLHKVSPLPEFQEKPNPR
KHSSKKNADSTEKSPAEEAVVSANTEPVEEEDANNEKDDDSLEPEKQTTQGETTITEEKE
ANPPSQAGGKRKVPMQGRWKGFDPVVFLKEETLIDSIKEFYGIKDESFPLYGHLVTRNTD
TSSVKRIYYVSKSVKEVLQLNFAVGQQLKIASVGLKMFERQSAKEGSSKPCSFRISAEGL
PVILPYITKQVLYTPMADFKHLLEHKSIRFPDFVNPQLSQKATELVLGCCVVILSDGEEP
VKADASTIAISCWRGNNSLAVMITLADCQELLERLAERTPKTGGGSVDGNNGDSVAMETA
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgggaagaggaagacagagaggtcgttctcagagaaaacatttcaaagagagcagagag
aatgtctggaaacgccccaaatccgatgctcccgacaaacccacctgggagcctttcttg
accgataaccctaacttcgaggagtattacaaggaacaagggatagtgaaagcagaagag
tgggatctgttcatggagattcttcgtaagcctttgcccgctgcctttagggttaactcc
aacagccagttttgcgatgagattatatccatattggagaatgactttgtgaaatctctt
caggctgaggccatagaaggtggtgagctggaggctattaagcccttgccttggtatcct
aagaatctcgcttggcattccaatttttcccgcaaggagattaggaaaaataagatactc
gagaggtttcatgaatttctgaaattggaaaatgaagttggaaacatgactagacaggaa
gctgttagcatggtgcctcctcttttcctcgacgtacatccagatcattttgtgcttgac
atgtgtgctgcaccgggttccaaaacatttcagctgctcgagattatacatggagcatca
gaaccaggaactctacctaatggaatggtggtggctaacgatgttgatttccaaagatct
aaccttcttattcaccaaacaaagagaatgtgcaccgcaaacttgatagtgactaatcat
gaagggcaacagttccccggttgtcgcttgaaaggactaagtgaagatatgcccattaat
caactttcctttgaccgtgttctgtgtgatgttccgtgcagtggtgatggtaccctgcgc
aaagctccagacatctggcggaaatggaattctggaatgggcaatggactccatagccta
caggttatccttgctatgaggggtttatcgctgttgaaagttggtgggaaaatgatatac
tcaacctgctcaatgaacccagttgaggatgaagctgttgtcgctgagattctaaggagg
tgtggagactctgttgaacttgtagatgtttctgataagcttcctgaactcatacggagg
ccaggtctcaagacatggaaggtgcgtgataaaggtgggtggtttacttcttacaaagac
gttcctcaaaaccgaagaggaggagtcattgtgagcatgtttccttctgggaaaaacctc
aaggactcaaccgaaacaactcaggagaatgagaatggtggtgttcaagatgagtgcaag
gaaacagagaactctgtggtggatgctattcctgatgaaccagtcgttgaagtctctgat
cttccacttgaacgttgcatgaggatagtgcctcatgatcagaacaccggagcctttttc
atcgcggtccttcacaaagtttcaccactgccagaatttcaggagaaaccaaatccaaga
aagcactcatctaagaaaaatgctgactcgacagaaaagtctccggctgaagaagctgtt
gtcagtgctaatactgaaccagtagaggaagaagatgcaaacaatgagaaggatgatgat
agcttggagcctgagaagcaaaccacacagggagaaaccaccatcactgaagagaaagaa
gccaatccaccgagtcaagcgggaggcaagagaaaagtaccgatgcaagggaggtggaaa
ggcttcgaccctgttgttttcctgaaagaggagacgttaatcgatagcatcaaagagttt
tacggtatcaaagatgaatcattcccattgtatggtcatctggtgacaagaaacaccgac
accagcagcgtgaagaggatttactatgtttcaaaatctgttaaggaagttcttcagctg
aatttcgcagtcggacagcagcttaagattgcttctgttggcctcaagatgtttgagaga
caatctgcaaaagaaggttcaagcaagccgtgctcattccgtatatcagcggagggacta
cctgtgatccttccatacatcaccaaacaagttctctacactccaatggcagacttcaaa
catcttcttgaacacaaatcgatcaggtttccggattttgtcaatccacagttgagtcag
aaagcaactgaacttgttttgggatgctgtgtggtgattctcagcgacggtgaagaacct
gtgaaagcagatgcatctacgattgctatcagttgctggagagggaataatagtttggct
gttatgatcactcttgcggattgccaggagctgctagagagacttgctgagagaacacca
aaaacaggtggtggttccgttgatgggaacaacggcgattcagtagctatggagacagct
taa
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