Brassica oleracea (wild cabbage): 106342509
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Entry
106342509 CDS
T04124
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 6
KO
K05391
cyclic nucleotide gated channel, plant
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
106342509
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
boe04040
]
106342509
Ion channels [BR:
boe04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
106342509
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Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
106342509
NCBI-ProteinID:
XP_013636917
UniProt:
A0A0D3C1M4
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Position
C4:complement(42081082..42084487)
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AA seq
745 aa
AA seq
DB search
MFDCGTNGVKSQVISGHREKFIRLESMDSRYSQSSDNTGLNKCTLNIQAPKRFAQGSKTS
SGSFKNGFRKGSEGLWSIGRSIGLGVSRAVFPEDLKVSEKKIFDPQDKFLLLCNKLFVAS
CILAVSVDPLFLYLPFINDKAKCIGIDRKLAIVATTLRTVIDSFYLFHMALRFRTAYVAP
SSRVFGRGELVIDPKQIAKRYLQQYFIIDLLSVLPLPQITVWRFLYTSKGANVLATKQAL
RYIVLVQYIPRFLRMYPLSSELKRTAGVFAETAWAGAAYYLLLYMLASHIVGALWYLLAL
ERNNDCWSKACVKKDNCTRNFLFCGNQNMEGYAAWYTAKSSVLQEKCPVNVTEGEEPPFD
FGIYSRALSSGIVSSKKFVSKYFFCLWWGLQNLSTLGQGLETSTYPGEVIFSIALAIAGL
LLFALLIGNMQTYLQSLTIRLEEMRVKRRDSEQWMHHRMLPPELRERVRRYDQYKWLETR
GVDEENIVSNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICMRLKPCLYTEKSFL
VREGDPVNEMLFIIRGRLESVTTDGGRSGFYNRSLLKEGDFCGDELLTWALDPKSGSNLP
SSTRTVKALTEVEAFALIADELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAW
RRYTKRKKLEQLRKEEEEEEETAARLIAGGSPYSIRATFLASKFAANALRSVHKNRIRKS
NLAPPSTKELVKFQKPPEPDFSADC
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattgtggcacaaatggagtcaaatctcaagtaatcagtggccatcgtgagaag
tttatcaggttagagagtatggactcaaggtactctcagagctccgataatacaggccta
aacaaatgcacattaaacatacaagcgcccaaacgtttcgctcaaggaagcaaaacatcg
tccggatctttcaagaacggcttcagaaaaggctccgagggtctttggtccattggaaga
tccataggactcggcgtttcgcgcgcagtctttccagaggatctcaaggtatcagagaag
aagatattcgatcctcaagacaagtttctcttgctctgcaacaagctcttcgttgcttcc
tgcatcctcgcggtttcagtggacccgctcttcttgtaccttccgtttataaacgataaa
gcgaagtgcatcggtatagacaggaagctggcgatcgtagcgacgacgctgaggacggtt
atagattctttttacctctttcacatggctttgaggtttagaacggcgtacgttgctcct
tcttcgcgggtttttgggagaggggagcttgtgattgatcctaaacagatagctaagcgg
tatctgcagcagtacttcatcattgatttgctttctgttcttcctcttccgcagattaca
gtttggagattcttatacacttctaagggtgctaatgttctggcgacgaagcaggcactt
cggtatatagtgttagttcaatacattccgcgttttcttaggatgtatcctttaagttca
gagctgaagagaacagcaggagtgttcgctgaaactgcttgggctggtgctgcttactac
ttgctactctacatgcttgcaagtcatattgttggggctttgtggtacttgcttgcctta
gaacgcaacaacgactgctggagtaaggcttgcgtcaagaaagacaactgcaccagaaac
tttttgttttgcggtaaccaaaacatggaaggttatgctgcttggtacactgcgaaaagt
tcggttcttcaggaaaagtgccctgtcaatgtcactgaaggggaagagcctccttttgat
tttggaatctactcgagagctctctcctctggcattgtctcgtctaagaagtttgtctca
aagtacttcttctgtttgtggtggggattacagaatcttagtacacttggtcaagggctt
gagactagcacttaccctggagaggttatattctccatagcacttgctattgctggactc
ctactctttgcccttctcattggtaacatgcagacttatcttcaatcgcttactatccgg
ttagaagaaatgcgagtcaaaagacgcgattcagaacagtggatgcatcaccgaatgctt
ccaccagaactgcgagaacgtgtcagaagatatgaccagtacaagtggttagagacgcgt
ggagttgatgaagagaacattgtctccaacctcccaaaggatctaagaagagacatcaaa
cgtcatctctgtctagccttagtccgaagagttccattgtttgaaaacatggatgagagg
ctgctagatgcaatctgcatgaggctcaagccgtgtctatacactgagaagtctttcttg
gtgcgtgagggagatcctgtgaacgagatgctcttcataatccgtggtcggctcgagagt
gtcaccactgacggtgggagaagcggattctacaaccgtagtttacttaaagaaggagac
ttctgcggggacgagcttttgacatgggcgcttgatcccaaatcaggctctaacttaccg
tcctcgacgagaaccgtcaaggccttgacagaagtagaagccttcgctttgatagctgat
gagcttaagtttgtggccagccagttcaggaggttacatagcagacaagtgcagcacact
tttagattctattcacagcagtggaggacttgggccgcttgctttatccaagctgcgtgg
agacggtacacaaagaggaagaaacttgaacaacttagaaaagaagaggaagaagaggag
gagactgctgcgaggcttattgcaggaggtagtccttatagcatcagagcgacgttcttg
gcttcgaagtttgctgccaatgcgcttcgtagtgttcacaagaaccggattaggaagtct
aatttggcaccaccatcaactaaagagctggtgaagtttcagaaacctccagaaccagat
ttctctgctgattgctga
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